[med-svn] [Git][med-team/galaxy][master] 8 commits: routine-update: Standards-Version: 4.5.0

Andreas Tille gitlab at salsa.debian.org
Tue May 12 15:27:29 BST 2020



Andreas Tille pushed to branch master at Debian Med / galaxy


Commits:
d4af1617 by Andreas Tille at 2020-05-12T16:23:40+02:00
routine-update: Standards-Version: 4.5.0

- - - - -
a3fd8816 by Andreas Tille at 2020-05-12T16:23:40+02:00
routine-update: debhelper-compat 12

- - - - -
16f09852 by Andreas Tille at 2020-05-12T16:23:57+02:00
routine-update: Point Vcs fields to salsa.debian.org

- - - - -
ce71ce57 by Andreas Tille at 2020-05-12T16:23:57+02:00
R-U: Trailing whitespace in debian/changelog

- - - - -
e16444a3 by Andreas Tille at 2020-05-12T16:23:58+02:00
routine-update: Add salsa-ci file

- - - - -
8f9b6caf by Andreas Tille at 2020-05-12T16:23:58+02:00
routine-update: Rules-Requires-Root: no

- - - - -
ebd164c4 by Andreas Tille at 2020-05-12T16:25:17+02:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html


Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
983e47ae by Andreas Tille at 2020-05-12T16:27:12+02:00
Python3

- - - - -


5 changed files:

- debian/changelog
- − debian/compat
- debian/control
- + debian/salsa-ci.yml
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,5 +1,5 @@
 galaxy (16.10-1) UNRELEASED; urgency=medium
 
-  * Package for Galaxy (Closes: #432472). 
+  * Package for Galaxy (Closes: #432472).
 
  -- Olivier Sallou <osallou at debian.org>  Sun, 15 Jan 2017 10:34:35 +0000


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-9


=====================================
debian/control
=====================================
@@ -4,109 +4,109 @@ Uploaders: Olivier Sallou <osallou at debian.org>
 Section: science
 Priority: optional
 #TODO add python-bx
-Build-Depends: debhelper (>= 9),
-               python-all,
-               python-all-dev,
-               python-setuptools,
-               python-nose,
-               python-nosehtmloutput,
-               python-docutils,
-               python-markupsafe,
-               python-yaml,
-               python-sqlalchemy,
+Build-Depends: debhelper-compat (= 12),
+               python3-all,
+               python3-all-dev,
+               python3-setuptools,
+               python3-nose,
+               python3-nosehtmloutput,
+               python3-docutils,
+               python3-markupsafe,
+               python3-yaml,
+               python3-sqlalchemy,
                mercurial,
-               python-numpy,
-               python-crypto,
-               python-paste,
-               python-pastedeploy,
-               python-wchartype,
-               python-repoze.lru,
-               python-routes,
-               python-webob,
-               python-webhelpers,
-               python-mako,
-               python-tz,
-               python-babel,
-               python-beaker,
-               python-dictobj,
-               python-parsley,
-               python-six,
-               python-whoosh,
-               python-cheetah,
-               python-markdown,
-               python-bioblend,
-               python-boto,
-               python-requests,
-               python-requests-toolbelt,
-               python-kombu,
-               python-amqp,
-               python-anyjson,
-               python-psutil,
-               python-migrate,
-               python-decorator,
-               python-tempita,
-               python-sqlparse,
-               python-pbr,
-               python-svgwrite,
-               python-paramiko,
-               python-ecdsa,
-               python-pysam,
+               python3-numpy,
+               python3-crypto,
+               python3-paste,
+               python3-pastedeploy,
+               python3-wchartype,
+               python3-repoze.lru,
+               python3-routes,
+               python3-webob,
+               python3-webhelpers,
+               python3-mako,
+               python3-tz,
+               python3-babel,
+               python3-beaker,
+               python3-dictobj,
+               python3-parsley,
+               python3-six,
+               python3-whoosh,
+               python3-cheetah,
+               python3-markdown,
+               python3-bioblend,
+               python3-boto,
+               python3-requests,
+               python3-requests-toolbelt,
+               python3-kombu,
+               python3-amqp,
+               python3-anyjson,
+               python3-psutil,
+               python3-migrate,
+               python3-decorator,
+               python3-tempita,
+               python3-sqlparse,
+               python3-pbr,
+               python3-svgwrite,
+               python3-paramiko,
+               python3-ecdsa,
+               python3-pysam,
                fabric,
                perl
-Standards-Version: 3.9.8
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/galaxy.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/galaxy.git
+Standards-Version: 4.5.0
+Vcs-Browser: https://salsa.debian.org/med-team/galaxy
+Vcs-Git: https://salsa.debian.org/med-team/galaxy.git
 Homepage: https://galaxyproject.org/
+Rules-Requires-Root: no
 
 Package: galaxy
 Architecture: all
 Depends: ${misc:Depends},
          ${perl:Depends},
-         ${python:Depends},
-               python,
-               python-docutils,
-               python-markupsafe,
-               python-yaml,
-               python-sqlalchemy,
-               mercurial,
-               python-numpy,
-               python-crypto,
-               python-paste,
-               python-pastedeploy,
-               python-wchartype,
-               python-repoze.lru,
-               python-routes,
-               python-webob,
-               python-webhelpers,
-               python-mako,
-               python-tz,
-               python-babel,
-               python-beaker,
-               python-dictobj,
-               python-parsley,
-               python-six,
-               python-whoosh,
-               python-cheetah,
-               python-markdown,
-               python-bioblend,
-               python-boto,
-               python-requests,
-               python-requests-toolbelt,
-               python-kombu,
-               python-amqp,
-               python-anyjson,
-               python-psutil,
-               python-migrate,
-               python-decorator,
-               python-tempita,
-               python-sqlparse,
-               python-pbr,
-               python-svgwrite,
-               python-paramiko,
-               python-ecdsa,
-               python-pysam,
-               perl,
-               fabric
+         ${python3:Depends},
+         python3,
+         python3-docutils,
+         python3-markupsafe,
+         python3-yaml,
+         python3-sqlalchemy,
+         mercurial,
+         python3-numpy,
+         python3-crypto,
+         python3-paste,
+         python3-pastedeploy,
+         python3-wchartype,
+         python3-repoze.lru,
+         python3-routes,
+         python3-webob,
+         python3-webhelpers,
+         python3-mako,
+         python3-tz,
+         python3-babel,
+         python3-beaker,
+         python3-dictobj,
+         python3-parsley,
+         python3-six,
+         python3-whoosh,
+         python3-cheetah,
+         python3-markdown,
+         python3-bioblend,
+         python3-boto,
+         python3-requests,
+         python3-requests-toolbelt,
+         python3-kombu,
+         python3-amqp,
+         python3-anyjson,
+         python3-psutil,
+         python3-migrate,
+         python3-decorator,
+         python3-tempita,
+         python3-sqlparse,
+         python3-pbr,
+         python3-svgwrite,
+         python3-paramiko,
+         python3-ecdsa,
+         python3-pysam,
+         fabric
 Description: scientific workflow and data integration platform for computational biology
  Galaxy is a scientific workflow, data integration, and data and analysis
  persistence and publishing platform that aims to make computational


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/galaxyproject/galaxy/issues
+Bug-Submit: https://github.com/galaxyproject/galaxy/issues/new
 Reference:
  - Author: Marcel Martin
    Title: >
@@ -14,3 +16,5 @@ Reference:
 Registry:
  - Name: OMICtools
    Entry: NA
+Repository: https://github.com/galaxyproject/galaxy.git
+Repository-Browse: https://github.com/galaxyproject/galaxy



View it on GitLab: https://salsa.debian.org/med-team/galaxy/-/compare/b2771ccb5bc845bebfc536260dec4e7b407fc228...983e47ae28efc594eb402e8ecbf767e34bf39516

-- 
View it on GitLab: https://salsa.debian.org/med-team/galaxy/-/compare/b2771ccb5bc845bebfc536260dec4e7b407fc228...983e47ae28efc594eb402e8ecbf767e34bf39516
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