[med-svn] [Git][med-team/pbalign][master] Update changelog - valid syntax to reduce noise in metadata gatherer even if package is removed

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / pbalign


Commits:
6619322c by Andreas Tille at 2020-05-12T15:25:57+00:00
Update changelog - valid syntax to reduce noise in metadata gatherer even if package is removed
- - - - -


1 changed file:

- debian/changelog


Changes:

=====================================
debian/changelog
=====================================
@@ -11,47 +11,8 @@ pbalign (0.3.2-2) UNRELEASED; urgency=medium
   * Set upstream metadata fields: Repository, Repository-Browse.
   * Drop pbh5tools from Recommends since its not available any more
 
-Not supported by latest pbcore and pbcommand any more:
-
-pylint --errors-only pbalign
-************* Module pbalign.pbalignrunner
-pbalign/pbalignrunner.py:50:0: E0611: No name 'pbparser_runner' in module 'pbcommand.cli' (no-name-in-module)
-************* Module pbalign.options
-pbalign/options.py:40:0: E0611: No name 'get_pbparser' in module 'pbcommand.models' (no-name-in-module)
-************* Module pbalign.alignservice.gmap
-pbalign/alignservice/gmap.py:40:0: E0611: No name 'Process' in module 'pbcore.util' (no-name-in-module)
-pbalign/alignservice/gmap.py:40:0: E0401: Unable to import 'pbcore.util.Process' (import-error)
-************* Module pbalign.alignservice.bowtie
-pbalign/alignservice/bowtie.py:39:0: E0611: No name 'Process' in module 'pbcore.util' (no-name-in-module)
-pbalign/alignservice/bowtie.py:39:0: E0401: Unable to import 'pbcore.util.Process' (import-error)
-************* Module pbalign.alignservice.fastabasedalign
-pbalign/alignservice/fastabasedalign.py:40:0: E0611: No name 'Process' in module 'pbcore.util' (no-name-in-module)
-pbalign/alignservice/fastabasedalign.py:40:0: E0401: Unable to import 'pbcore.util.Process' (import-error)
-************* Module pbalign.tasks.align_minorvariants
-pbalign/tasks/align_minorvariants.py:9:0: E0611: No name 'get_pbparser' in module 'pbcommand.models' (no-name-in-module)
-pbalign/tasks/align_minorvariants.py:10:0: E0611: No name 'pbparser_runner' in module 'pbcommand.cli' (no-name-in-module)
-************* Module pbalign.utils.RgnH5IO
-pbalign/utils/RgnH5IO.py:13:0: E0611: No name 'BasH5IO' in module 'pbcore.io' (no-name-in-module)
-pbalign/utils/RgnH5IO.py:13:0: E0401: Unable to import 'pbcore.io.BasH5IO' (import-error)
-pbalign/utils/RgnH5IO.py:56:0: E1126: Sequence index is not an int, slice, or instance with __index__ (invalid-sequence-index)
-************* Module pbalign.utils.fileutil
-pbalign/utils/fileutil.py:42:0: E0611: No name 'Process' in module 'pbcore.util' (no-name-in-module)
-pbalign/utils/fileutil.py:42:0: E0401: Unable to import 'pbcore.util.Process' (import-error)
-************* Module pbalign.utils.progutil
-pbalign/utils/progutil.py:37:0: E0611: No name 'Process' in module 'pbcore.util' (no-name-in-module)
-pbalign/utils/progutil.py:37:0: E0401: Unable to import 'pbcore.util.Process' (import-error)
-************* Module pbalign.tools.createChemistryHeader
-pbalign/tools/createChemistryHeader.py:14:0: E0611: No name 'BasH5IO' in module 'pbcore.io' (no-name-in-module)
-************* Module pbalign.tools.loadChemistry
-pbalign/tools/loadChemistry.py:71:14: E0602: Undefined variable 'BasH5Reader' (undefined-variable)
-************* Module pbalign.tools.mask_aligned_reads
-pbalign/tools/mask_aligned_reads.py:12:0: E0611: No name 'CmpH5Reader' in module 'pbcore.io' (no-name-in-module)
-pbalign/tools/mask_aligned_reads.py:12:0: E0611: No name 'EmptyCmpH5Error' in module 'pbcore.io' (no-name-in-module)
-pbalign/tools/mask_aligned_reads.py:124:13: E1123: Unexpected keyword argument 'version' in constructor call (unexpected-keyword-arg)
-make: *** [Makefile:19: pylint] Fehler 2
-
-
-Issue tracker for https://github.com/PacificBiosciences/pbalign/ is disabled - so no idea how to ask for updates
+  Removed since not supported by latest pbcore and pbcommand any more:
+  Issue tracker for https://github.com/PacificBiosciences/pbalign/ is disabled - so no idea how to ask for updates
 
  -- Andreas Tille <tille at debian.org>  Fri, 13 Dec 2019 10:59:33 +0100
 



View it on GitLab: https://salsa.debian.org/med-team/pbalign/-/commit/6619322cfadbaa61ce0561b4a0dbdc7cb726537b

-- 
View it on GitLab: https://salsa.debian.org/med-team/pbalign/-/commit/6619322cfadbaa61ce0561b4a0dbdc7cb726537b
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