[med-svn] [Git][med-team/picard-tools][upstream] New upstream version 2.22.8+dfsg

[Olivier Sallou]

Olivier Sallou pushed to branch upstream at Debian Med / picard-tools


Commits:
f61f858d by Olivier Sallou at 2020-05-29T08:23:50+00:00
New upstream version 2.22.8+dfsg
- - - - -


28 changed files:

- − .pullapprove.yml
- .travis.yml
- Dockerfile
- README.md
- build.gradle
- build_push_docker.sh
- + docs/fingerprinting/main.pdf
- + docs/fingerprinting/main.tex
- gradle/wrapper/gradle-wrapper.properties
- gradlew
- settings.gradle
- src/main/java/picard/analysis/AbstractWgsMetricsCollector.java
- src/main/java/picard/analysis/AdapterUtility.java
- src/main/java/picard/analysis/AlignmentSummaryMetrics.java
- src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java
- src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java
- src/main/java/picard/analysis/CollectBaseDistributionByCycle.java
- src/main/java/picard/analysis/CollectGcBiasMetrics.java
- src/main/java/picard/analysis/CollectInsertSizeMetrics.java
- src/main/java/picard/analysis/CollectJumpingLibraryMetrics.java
- src/main/java/picard/analysis/CollectMultipleMetrics.java
- src/main/java/picard/analysis/CollectRawWgsMetrics.java
- src/main/java/picard/analysis/CollectRnaSeqMetrics.java
- src/main/java/picard/analysis/CollectRrbsMetrics.java
- src/main/java/picard/analysis/CollectWgsMetrics.java
- src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java
- src/main/java/picard/analysis/CompareMetrics.java
- src/main/java/picard/analysis/FastWgsMetricsCollector.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/commit/f61f858d4d6475b701ac5d2720dae5f32246840c

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