[med-svn] [Git][med-team/nim-hts][master] Binary split to install testing data

[Nilesh Patra]

Nilesh Patra pushed to branch master at Debian Med / nim-hts


Commits:
cf687b6b by Nilesh Patra at 2020-11-01T12:44:28+05:30
Binary split to install testing data

- - - - -


3 changed files:

- debian/control
- + debian/nim-hts-examples.install
- debian/rules


Changes:

=====================================
debian/control
=====================================
@@ -20,7 +20,20 @@ Package: nim-hts-dev
 Architecture: all
 Depends: ${misc:Depends}, nim
 Recommends: libhts3
+Suggests: nim-hts-examples
 Description: wrapper for hts C library
  The hts library is well accepted for the handling of millions of
  DNA sequences from what once was the high-throughput sequencing machines
  in biological research and medical diagnostics/therapy control.
+
+Package: nim-hts-examples
+Architecture: all
+Depends: ${misc:Depends}
+Enhances: nim-hts-dev
+Description: examples for nim-hts: wrapper for hts C library
+ The hts library is well accepted for the handling of millions of
+ DNA sequences from what once was the high-throughput sequencing machines
+ in biological research and medical diagnostics/therapy control.
+ .
+ This package contains a test data set as well as sample scripts
+ running some test suite provided by Debian also as autopkgtest.


=====================================
debian/nim-hts-examples.install
=====================================
@@ -0,0 +1,10 @@
+tests/*.nim			usr/share/doc/hts-nim-examples
+tests/*.sam			usr/share/doc/hts-nim-examples
+tests/test_files		usr/share/doc/hts-nim-examples
+tests/*.vcf			usr/share/doc/hts-nim-examples
+tests/*.bcf			usr/share/doc/hts-nim-examples
+tests/*.bam*			usr/share/doc/hts-nim-examples
+tests/*.fa*			usr/share/doc/hts-nim-examples
+debian/missing-sources/*	usr/share/doc/hts-nim-examples
+debian/tests/run-unit-test	usr/share/doc/hts-nim-examples
+debian/tests/*.nim		usr/share/doc/hts-nim-examples


=====================================
debian/rules
=====================================
@@ -27,11 +27,9 @@ override_dh_auto_test:
 	nim c --nimcache:$(CURDIR)/tests/nimcache tests/all.nim
 	tests/all
 
-
 override_dh_auto_clean:
 	dh_auto_clean
 	# remnants from testing
 	rm -f ____t.vcf t.gz ti.txt.gz ti.txt.gz.csi
 	rm -f tests/run tests/HG02002.bam.csi tests/auxtest tests/newsample.vcf tests/outmissing.vcf tests/outv.vcf tests/outz.vcf tests/sample.fa.fai tests/all tests/htstest tests/bgzftest tests/bamtest
 	rm -rf tests/nimcache
-



View it on GitLab: https://salsa.debian.org/med-team/nim-hts/-/commit/cf687b6b29a9546e41570b6f1bec808b36e333da

-- 
View it on GitLab: https://salsa.debian.org/med-team/nim-hts/-/commit/cf687b6b29a9546e41570b6f1bec808b36e333da
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