[med-svn] [Git][med-team/radiant][master] 5 commits: Remove data and extra binary - use multi-orig tarball instead

[Nilesh Patra]

Nilesh Patra pushed to branch master at Debian Med / radiant


Commits:
79173805 by Nilesh Patra at 2020-11-02T14:19:29+05:30
Remove data and extra binary - use multi-orig tarball instead

- - - - -
22f513aa by Nilesh Patra at 2020-11-02T14:20:03+05:30
New upstream version 2.7.1+dfsg
- - - - -
47642433 by Nilesh Patra at 2020-11-02T14:21:16+05:30
Update upstream source from tag 'upstream/2.7.1+dfsg'

Update to upstream version '2.7.1+dfsg'
with Debian dir ea62367240ae3b10ac0d2bc2f503d9c56ecb9e9c
- - - - -
6e1da98d by Nilesh Patra at 2020-11-02T14:32:16+05:30
Fix tests

- - - - -
823c9585 by Nilesh Patra at 2020-11-02T14:32:31+05:30
Update changelog

- - - - -


10 changed files:

- debian/tests/README → debian-tests-data/README
- debian/tests/data/ktImportTextTest.txt → debian-tests-data/ktImportTextTest.txt
- debian/tests/data/ktImportXMLTest.xml → debian-tests-data/ktImportXMLTest.xml
- debian/tests/data/rdp_sample.fa → debian-tests-data/rdp_sample.fa
- debian/tests/data/taxonomy/taxonomy.tab → debian-tests-data/taxonomy/taxonomy.tab
- debian/changelog
- debian/control
- + debian/gbp.conf
- − debian/radiant-examples.docs
- debian/tests/run-unit-test


Changes:

=====================================
debian/tests/README → debian-tests-data/README
=====================================


=====================================
debian/tests/data/ktImportTextTest.txt → debian-tests-data/ktImportTextTest.txt
=====================================


=====================================
debian/tests/data/ktImportXMLTest.xml → debian-tests-data/ktImportXMLTest.xml
=====================================


=====================================
debian/tests/data/rdp_sample.fa → debian-tests-data/rdp_sample.fa
=====================================


=====================================
debian/tests/data/taxonomy/taxonomy.tab → debian-tests-data/taxonomy/taxonomy.tab
=====================================


=====================================
debian/changelog
=====================================
@@ -5,7 +5,6 @@ radiant (2.7.1+dfsg-2) unstable; urgency=medium
   * d/u/metadata: yamllint
 
   [ Nilesh Patra ]
-  * Add binary: radiant-examples
   * Add autopkgtests
   * Install relevant examples
   * Update description
@@ -15,6 +14,7 @@ radiant (2.7.1+dfsg-2) unstable; urgency=medium
   * Add "Rules-Requires-Root:no"
   * Update upstream/metadata
   * compat version: 13
+  * Add multi-orig tarball for testing data
 
  -- Nilesh Patra <npatra974 at gmail.com>  Fri, 21 Aug 2020 08:06:28 +0000
 


=====================================
debian/control
=====================================
@@ -19,16 +19,3 @@ Description: explore hierarchical metagenomic data with zoomable pie charts
  Krona charts include support for several bioinformatics tools and raw
  data formats. The charts can be viewed with a recent version of any
  major web browser.
-
-Package: radiant-examples
-Architecture: all
-Depends: ${misc:Depends}
-Enhances: radiant
-Description: Examples for radiant: explore hierarchical metagenomic data
- Krona allows hierarchical data to be explored with zoomable pie charts.
- Krona charts include support for several bioinformatics tools and raw
- data formats. The charts can be viewed with a recent version of any
- major web browser.
- .
- This package contains a test data set as well as sample scripts
- running some test suite provided by Debian also as autopkgtest.


=====================================
debian/gbp.conf
=====================================
@@ -0,0 +1,4 @@
+[DEFAULT]
+pristine-tar=True
+filter=[ '.gitignore', '.travis.yml', '.git*' ]
+component=['debian-tests-data']


=====================================
debian/radiant-examples.docs deleted
=====================================
@@ -1,2 +0,0 @@
-debian/tests/data/*
-KronaTools/data/ec.tsv


=====================================
debian/tests/run-unit-test
=====================================
@@ -2,13 +2,15 @@
 set -e
 
 pkg=radiant
+CUR_DIR=`pwd`
 
 if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
   AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
   trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
 fi
 
-cp /usr/share/doc/${pkg}-examples/* -a "${AUTOPKGTEST_TMP}"
+cp ${CUR_DIR}/debian-tests-data/* -a "${AUTOPKGTEST_TMP}"
+cp ${CUR_DIR}/KronaTools/data/ec.tsv "${AUTOPKGTEST_TMP}"
 
 cd "${AUTOPKGTEST_TMP}"
 gunzip -r *



View it on GitLab: https://salsa.debian.org/med-team/radiant/-/compare/f96f385941a3f1cce4d161d142203df198fb32dc...823c9585b0360e581b535177d01a2ff9dd8746bb

-- 
View it on GitLab: https://salsa.debian.org/med-team/radiant/-/compare/f96f385941a3f1cce4d161d142203df198fb32dc...823c9585b0360e581b535177d01a2ff9dd8746bb
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