[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Tue Nov 3 13:45:21 GMT 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
7e607d0f by Andreas Tille at 2020-11-03T13:45:16+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
+Last-Update: Tue, 03 Nov 2020 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
@@ -6,9 +6,9 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  orthanc                       |     93 | {practice,imaging,covid-19}                         | 
  orthanc-wsi                   |     46 | {practice,covid-19,his,oncology,imaging,laboratory} | 
  htsjdk                        |     37 | {bio-dev}                                           | 
- dicomscope                    |     36 | {imaging}                                           | 
  gdcm                          |     36 | {imaging-dev}                                       | 
- dicom3tools                   |     33 | {imaging}                                           | 
+ dicomscope                    |     35 | {imaging}                                           | 
+ dicom3tools                   |     34 | {imaging}                                           | 
  dcm2niix                      |     23 | {imaging}                                           | 
  gdcm                          |     19 | {imaging,covid-19}                                  | 
  gnumed-server                 |     17 | {practice,covid-19}                                 | 
@@ -26,18 +26,17 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  openslide                     |     10 | {imaging}                                           | 
  adun.app                      |      9 | {bio}                                               | 
  insighttoolkit4               |      9 | {imaging-dev}                                       | 
- librg-utils-perl              |      9 | {bio}                                               | 
  ngs-sdk                       |      9 | {bio-dev}                                           | 
- dicompyler                    |      8 | {oncology}                                          | 
- melting                       |      8 | {bio,cloud}                                         | 
+ librg-utils-perl              |      8 | {bio}                                               | 
  obitools                      |      8 | {bio}                                               | 
- staden                        |      7 | {bio}                                               | 
+ dicompyler                    |      7 | {oncology}                                          | 
  ea-utils                      |      6 | {bio}                                               | 
+ melting                       |      6 | {bio,cloud}                                         | 
  multiqc                       |      6 | {covid-19,bio}                                      | 
  ngs-sdk                       |      6 | {bio-dev}                                           | 
  orthanc-webviewer             |      6 | {imaging}                                           | 
- predictprotein                |      6 | {bio}                                               | 
  pymia                         |      6 | {imaging-dev}                                       | 
+ staden                        |      6 | {bio}                                               | 
  treeview                      |      6 | {bio,bio-phylogeny}                                 | 
  bart-view                     |      5 | {imaging}                                           | 
  biojava-live                  |      5 | {bio-dev}                                           | 
@@ -46,7 +45,9 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  jebl2                         |      5 | {bio-dev}                                           | 
  lagan                         |      5 | {bio}                                               | 
  libminc                       |      5 | {imaging-dev}                                       | 
+ libsbml                       |      5 | {bio-dev}                                           | 
  mipe                          |      5 | {cloud,bio}                                         | 
+ predictprotein                |      5 | {bio}                                               | 
  salmon                        |      5 | {bio,covid-19}                                      | 
  sibsim4                       |      5 | {bio,cloud}                                         | 
  stacks                        |      5 | {bio}                                               | 
@@ -66,7 +67,6 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  jellyfish1                    |      4 | {bio}                                               | 
  lamarc                        |      4 | {bio}                                               | 
  libncl                        |      4 | {bio}                                               | 
- libsbml                       |      4 | {bio-dev}                                           | 
  mrs                           |      4 | {bio}                                               | 
  orthanc-dicomweb              |      4 | {covid-19,imaging}                                  | 
  phast                         |      4 | {bio}                                               | 
@@ -119,7 +119,6 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  suitename                     |      3 | {bio}                                               | 
  surankco                      |      3 | {bio}                                               | 
  zalign                        |      3 | {bio,cloud}                                         | 
- acedb                         |      2 | {bio,cloud}                                         | 
  atropos                       |      2 | {bio}                                               | 
  canu                          |      2 | {bio}                                               | 
  cat-bat                       |      2 | {bio,covid-19}                                      | 
@@ -135,7 +134,6 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  mauve-aligner                 |      2 | {bio}                                               | 
  orthanc-mysql                 |      2 | {imaging}                                           | 
  orthanc-postgresql            |      2 | {imaging}                                           | 
- oscar                         |      2 | {data,practice,tools}                               | 
  pilercr                       |      2 | {bio}                                               | 
  proalign                      |      2 | {bio,bio-phylogeny}                                 | 
  prottest                      |      2 | {bio-phylogeny,bio}                                 | 
@@ -145,9 +143,9 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  sga                           |      2 | {bio}                                               | 
  skesa                         |      2 | {bio}                                               | 
  srf                           |      2 | {bio-dev}                                           | 
- stringtie                     |      2 | {covid-19,bio}                                      | 
  trace2dbest                   |      2 | {bio}                                               | 
  tvc                           |      2 | {bio}                                               | 
+ acedb                         |      1 | {bio,cloud}                                         | 
  bbmap                         |      1 | {bio,covid-19}                                      | 
  biosig                        |      1 | {physics,imaging-dev}                               | 
  blasr                         |      1 | {bio,bio-ngs}                                       | 
@@ -166,6 +164,7 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  nutsqlite                     |      1 | {tools}                                             | 
  opencfu                       |      1 | {laboratory}                                        | 
  opensurgsim                   |      1 | {imaging-dev}                                       | 
+ oscar                         |      1 | {data,practice,tools}                               | 
  papyrus                       |      1 | {imaging-dev}                                       | 
  plasmidid                     |      1 | {covid-19,bio}                                      | 
  pplacer                       |      1 | {bio,bio-phylogeny,covid-19}                        | 
@@ -173,6 +172,7 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  samtools-legacy               |      1 | {bio-dev}                                           | 
  seqan                         |      1 | {bio-dev}                                           | 
  sift                          |      1 | {bio}                                               | 
+ simrisc                       |      1 | {oncology}                                          | 
  skewer                        |      1 | {bio}                                               | 
  spaln                         |      1 | {bio,covid-19}                                      | 
  thesias                       |      1 | {covid-19,bio}                                      | 
@@ -236,7 +236,6 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  seq-gen                       |      0 | {bio}                                               | 
  sight                         |      0 | {imaging-dev}                                       | 
  simpleitk                     |      0 | {imaging-dev}                                       | 
- simrisc                       |      0 | {oncology}                                          | 
  smrtanalysis                  |      0 | {bio,covid-19}                                      | 
  varna                         |      0 | {bio}                                               | 
  vtk-dicom                     |      0 | {imaging-dev}                                       | 
@@ -244,5 +243,5 @@ Last-Update: Tue, 03 Nov 2020 01:42:04 +0000
  orthanc-python                |     -1 | {covid-19}                                          | 
  shovill                       |     -1 | {bio,covid-19}                                      | 
  svim                          |     -1 | {bio}                                               | 
-(272 rows)
+(271 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7e607d0f68dd02100ae648f8d5bcfaf92d07b1bc

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7e607d0f68dd02100ae648f8d5bcfaf92d07b1bc
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