[med-svn] [Git][med-team/vt][master] 2 commits: Add patch 0002-hts-1.11.patch

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / vt


Commits:
e096e69b by Antoni Villalonga at 2020-11-09T08:00:54+01:00
Add patch 0002-hts-1.11.patch

- - - - -
0129704e by Andreas Tille at 2020-11-09T08:02:21+00:00
Merge branch 'hts-1.11' into 'master'

Add patch 0002-hts-1.11.patch

See merge request med-team/vt!2
- - - - -


2 changed files:

- + debian/patches/0002-hts-1.11.patch
- debian/patches/series


Changes:

=====================================
debian/patches/0002-hts-1.11.patch
=====================================
@@ -0,0 +1,17 @@
+From: Antoni Villalonga <antoni at friki.cat>
+Last-Update: Mon, 9 Nov 2020 07:53:33 -0100
+Subject: Update to libhts-1.11
+Author: Jason Bacon
+Forwarded: https://github.com/atks/vt/issues/112#issuecomment-723673843
+
+--- a/hts_utils.h
++++ b/hts_utils.h
+@@ -49,7 +49,7 @@
+ 
+ KHASH_MAP_INIT_STR(s, faidx1_t)
+ 
+-struct __faidx_t {
++struct faidx_t {
+     BGZF *bgzf;
+     int n, m;
+     char **name;


=====================================
debian/patches/series
=====================================
@@ -2,3 +2,4 @@ makefile
 fix-spelling
 test-fail-on-error
 0001-updated-faidx_fetch_uc_seq.patch
+0002-hts-1.11.patch



View it on GitLab: https://salsa.debian.org/med-team/vt/-/compare/c9a3a2be69f779509142f49346a01d16dea93f75...0129704ee1812239dc73a5c36d6dc6f013613c02

-- 
View it on GitLab: https://salsa.debian.org/med-team/vt/-/compare/c9a3a2be69f779509142f49346a01d16dea93f75...0129704ee1812239dc73a5c36d6dc6f013613c02
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