[med-svn] [Git][med-team/plast][master] 9 commits: routine-update: Standards-Version: 4.5.0

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / plast


Commits:
b46e7a63 by Andreas Tille at 2020-11-10T18:24:03+01:00
routine-update: Standards-Version: 4.5.0

- - - - -
e7245596 by Andreas Tille at 2020-11-10T18:24:03+01:00
routine-update: debhelper-compat 13

- - - - -
51cad691 by Andreas Tille at 2020-11-10T18:24:05+01:00
routine-update: Secure URI in copyright format

- - - - -
771a3a1d by Andreas Tille at 2020-11-10T18:26:47+01:00
routine-update: Do not parse d/changelog

- - - - -
f7368b30 by Andreas Tille at 2020-11-10T18:26:47+01:00
routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g

- - - - -
48fb80ca by Andreas Tille at 2020-11-10T18:26:47+01:00
routine-update: Add salsa-ci file

- - - - -
6e895d5e by Andreas Tille at 2020-11-10T18:26:47+01:00
routine-update: Rules-Requires-Root: no

- - - - -
d2307b99 by Andreas Tille at 2020-11-10T18:26:55+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
c2c6be62 by Andreas Tille at 2020-11-10T18:30:36+01:00
routine-update: Ready to upload to unstable

- - - - -


7 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/salsa-ci.yml
- debian/tests/run-unit-test
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,17 @@
+plast (2.3.2+dfsg-2) unstable; urgency=medium
+
+  * Standards-Version: 4.5.0 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Secure URI in copyright format (routine-update)
+  * Do not parse d/changelog (routine-update)
+  * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
+    Repository-Browse.
+
+ -- Andreas Tille <tille at debian.org>  Tue, 10 Nov 2020 18:26:55 +0100
+
 plast (2.3.2+dfsg-1) unstable; urgency=medium
 
   * Point watch file to github


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -3,14 +3,15 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
                cmake,
                libpcre3-dev,
                default-jdk
-Standards-Version: 4.1.5
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/plast
 Vcs-Git: https://salsa.debian.org/med-team/plast.git
 Homepage: https://plast.inria.fr/
+Rules-Requires-Root: no
 
 Package: plast
 Architecture: any-amd64 x32


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: PLAST
 Upstream-Contact: Dominique Lavenier <lavenier at irisa.fr>,
                   Patrick Durand <patrick.durand at inria.fr>


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/tests/run-unit-test
=====================================
@@ -1,10 +1,10 @@
 #!/bin/sh -e
 
 pkg=plast
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
 fi
-cd $ADTTMP
+cd $AUTOPKGTEST_TMP
 cp -a /usr/share/doc/${pkg}/example/db .
 find . -type f -name "*.gz" -exec gunzip \{\} \;
 


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/PLAST-software/plast-library/issues
+Bug-Submit: https://github.com/PLAST-software/plast-library/issues/new
 Reference:
  Author: Van Hoa Nguyen and Dominique Lavenier
  Title: "PLAST: parallel local alignment search tool for database comparison"
@@ -18,3 +20,5 @@ Registry:
    Entry: NA
  - Name: bio.tools
    Entry: plast
+Repository: https://github.com/PLAST-software/plast-library.git
+Repository-Browse: https://github.com/PLAST-software/plast-library



View it on GitLab: https://salsa.debian.org/med-team/plast/-/compare/b02b9c15167fec14bd32e57b9226b66638fbdd90...c2c6be622df004def5406095fdb0845964c41342

-- 
View it on GitLab: https://salsa.debian.org/med-team/plast/-/compare/b02b9c15167fec14bd32e57b9226b66638fbdd90...c2c6be622df004def5406095fdb0845964c41342
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