[med-svn] [Git][med-team/gnumed-server][master] 6 commits: routine-update: New upstream version
Andreas Tille
gitlab at salsa.debian.org
Thu Nov 12 16:45:32 GMT 2020
Andreas Tille pushed to branch master at Debian Med / gnumed-server
Commits:
118666bd by Andreas Tille at 2020-11-12T17:07:04+01:00
routine-update: New upstream version
- - - - -
f301a928 by Andreas Tille at 2020-11-12T17:07:07+01:00
New upstream version 22.14
- - - - -
9dcb25c6 by Andreas Tille at 2020-11-12T17:08:35+01:00
Update upstream source from tag 'upstream/22.14'
Update to upstream version '22.14'
with Debian dir 6d5a355217d635f0bc26db773236122a03b93c99
- - - - -
6dbeccd9 by Andreas Tille at 2020-11-12T17:15:42+01:00
Refresh patch
- - - - -
cc68c8c9 by Andreas Tille at 2020-11-12T17:43:13+01:00
Removed unused override
- - - - -
278fb1fe by Andreas Tille at 2020-11-12T17:44:59+01:00
Upload to unstable
- - - - -
10 changed files:
- debian/changelog
- − debian/lintian-overrides
- debian/patches/python3.patch
- server/bootstrap/bootstrap_gm_db_system.py
- server/doc/schema/gnumed-entire_schema.html
- server/pycommon/gmMimeMagic.py
- server/pycommon/gmPG2.py
- server/pycommon/gmScriptingListener.py
- server/pycommon/gmTools.py
- server/sql/v21-v22/fixups/v22-release_notes-fixup.sql
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+gnumed-server (22.14-1) unstable; urgency=medium
+
+ * New upstream version
+ * Removed unused override
+
+ -- Andreas Tille <tille at debian.org> Thu, 12 Nov 2020 17:43:21 +0100
+
gnumed-server (22.13-1) unstable; urgency=medium
* New upstream version
=====================================
debian/lintian-overrides deleted
=====================================
@@ -1 +0,0 @@
-gnumed-server: hyphen-used-as-minus-sign usr/share/man/man8/gm-fingerprint_db.8.gz:48
=====================================
debian/patches/python3.patch
=====================================
@@ -5,37 +5,37 @@ Last-Update: Tue, 03 Mar 2020 15:17:28 +0100
--- a/server/pycommon/gmMimeMagic.py
+++ b/server/pycommon/gmMimeMagic.py
@@ -225,20 +225,20 @@ magic = [
- [0L, 'string', '=', '#! /usr/local/bin/perl', 'application/x-perl'],
- [0L, 'string', '=', '#! /usr/local/bin/perl', 'application/x-perl'],
- [0L, 'string', '=', 'eval "exec /usr/local/bin/perl', 'application/x-perl'],
-- [0L, 'string', '=', '#!/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#! /bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#! /bin/python', 'application/x-python'],
-- [0L, 'string', '=', 'eval "exec /bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#!/usr/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#! /usr/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#! /usr/bin/python', 'application/x-python'],
-- [0L, 'string', '=', 'eval "exec /usr/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#!/usr/local/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#! /usr/local/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#! /usr/local/bin/python', 'application/x-python'],
-- [0L, 'string', '=', 'eval "exec /usr/local/bin/python', 'application/x-python'],
-- [0L, 'string', '=', '#!/usr/bin/env python', 'application/x-python'],
-- [0L, 'string', '=', '#! /usr/bin/env python', 'application/x-python'],
-+ [0L, 'string', '=', '#!/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', 'eval "exec /bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#!/usr/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /usr/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /usr/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', 'eval "exec /usr/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#!/usr/local/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /usr/local/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /usr/local/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', 'eval "exec /usr/local/bin/python3', 'application/x-python'],
-+ [0L, 'string', '=', '#!/usr/bin/env python3', 'application/x-python'],
-+ [0L, 'string', '=', '#! /usr/bin/env python3', 'application/x-python'],
- [0L, 'string', '=', '#!/bin/rc', 'text/script'],
- [0L, 'string', '=', '#! /bin/rc', 'text/script'],
- [0L, 'string', '=', '#! /bin/rc', 'text/script'],
+ [0, 'string', '=', '#! /usr/local/bin/perl', 'application/x-perl'],
+ [0, 'string', '=', '#! /usr/local/bin/perl', 'application/x-perl'],
+ [0, 'string', '=', 'eval "exec /usr/local/bin/perl', 'application/x-perl'],
+- [0, 'string', '=', '#!/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#! /bin/python', 'application/x-python'],
+- [0, 'string', '=', '#! /bin/python', 'application/x-python'],
+- [0, 'string', '=', 'eval "exec /bin/python', 'application/x-python'],
+- [0, 'string', '=', '#!/usr/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#! /usr/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#! /usr/bin/python', 'application/x-python'],
+- [0, 'string', '=', 'eval "exec /usr/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#!/usr/local/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#! /usr/local/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#! /usr/local/bin/python', 'application/x-python'],
+- [0, 'string', '=', 'eval "exec /usr/local/bin/python', 'application/x-python'],
+- [0, 'string', '=', '#!/usr/bin/env python', 'application/x-python'],
+- [0, 'string', '=', '#! /usr/bin/env python', 'application/x-python'],
++ [0, 'string', '=', '#!/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#! /bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#! /bin/python3', 'application/x-python'],
++ [0, 'string', '=', 'eval "exec /bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#!/usr/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#! /usr/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#! /usr/bin/python3', 'application/x-python'],
++ [0, 'string', '=', 'eval "exec /usr/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#!/usr/local/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#! /usr/local/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#! /usr/local/bin/python3', 'application/x-python'],
++ [0, 'string', '=', 'eval "exec /usr/local/bin/python3', 'application/x-python'],
++ [0, 'string', '=', '#!/usr/bin/env python3', 'application/x-python'],
++ [0, 'string', '=', '#! /usr/bin/env python3', 'application/x-python'],
+ [0, 'string', '=', '#!/bin/rc', 'text/script'],
+ [0, 'string', '=', '#! /bin/rc', 'text/script'],
+ [0, 'string', '=', '#! /bin/rc', 'text/script'],
=====================================
server/bootstrap/bootstrap_gm_db_system.py
=====================================
@@ -773,11 +773,11 @@ class database:
curs.execute("alter database %s set track_commit_timestamp to on" % self.name)
except:
_log.exception(u'PostgreSQL version < 9.5 does not support <track_commit_timestamp> OR <track_commit_timestamp> cannot be set at runtime')
+
curs.close()
self.conn.commit()
-
curs = self.conn.cursor()
- gmPG2.log_pg_settings(curs = curs)
+ gmConnectionPool.log_pg_settings(curs = curs)
curs.close()
self.conn.commit()
@@ -856,7 +856,7 @@ class database:
cursor.execute(cmd)
except:
_log.exception(u">>>[%s]<<< failed" % cmd)
- _log.debug(u'conn state after failed DROP: %s', gmPG2.capture_conn_state(self.conn))
+ _log.debug(u'conn state after failed DROP: %s', gmConnectionPool.log_conn_state(self.conn))
return False
finally:
cursor.close()
=====================================
server/doc/schema/gnumed-entire_schema.html
=====================================
@@ -112,7 +112,7 @@
<body>
<!-- Primary Index -->
- <p><br><br>Dumped on 2020-07-23</p>
+ <p><br><br>Dumped on 2020-11-09</p>
<h1><a name="index">Index of database - gnumed_v22</a></h1>
<ul>
@@ -125987,7 +125987,7 @@ DECLARE
_lang ALIAS FOR $1;
BEGIN
raise notice 'Forcing current language to [%] without checking for translations..', _lang;
- delete from i18n.curr_lang where user = SESSION_USER;
+ delete from i18n.curr_lang where db_user = SESSION_USER;
insert into i18n.curr_lang (lang, db_user) values (_lang, SESSION_USER);
return true;
END;
@@ -126055,14 +126055,14 @@ END;
<h3>Returns: boolean</h3>
<h3>Language: PLPGSQL</h3>
<p>set preferred language:
- - for "current user"
+ - for "current (session) user"
- only if translations for this language are available</p>
<pre>
DECLARE
_lang ALIAS FOR $1;
BEGIN
if exists(select pk from i18n.translations where lang = _lang) then
- delete from i18n.curr_lang where user = SESSION_USER;
+ delete from i18n.curr_lang where db_user = SESSION_USER;
insert into i18n.curr_lang (lang, db_user) values (_lang, SESSION_USER);
return true;
end if;
=====================================
server/pycommon/gmMimeMagic.py
=====================================
The diff for this file was not included because it is too large.
=====================================
server/pycommon/gmPG2.py
=====================================
@@ -2096,7 +2096,6 @@ def sanity_check_database_settings():
#=======================================================================
# main
#-----------------------------------------------------------------------
-log_pg_settings = gmConnectionPool.log_pg_settings
log_pg_exception_details = gmConnectionPool.log_pg_exception_details
exception_is_connection_loss = gmConnectionPool.exception_is_connection_loss
=====================================
server/pycommon/gmScriptingListener.py
=====================================
@@ -3,7 +3,6 @@
This module implements threaded listening for scripting.
"""
#=====================================================================
-__version__ = "$Revision: 1.7 $"
__author__ = "K.Hilbert <karsten.hilbert at gmx.net>"
import sys, time, threading, select, logging
@@ -76,7 +75,7 @@ class cScriptingListener:
except Exception:
pass
except Exception:
- print sys.exc_info()
+ print(sys.exc_info())
self._thread = None
@@ -146,7 +145,7 @@ if __name__ == "__main__":
s = xmlrpclib.client.ServerProxy('http://localhost:9999')
try:
t = s.tell_time()
- print t
+ print(t)
except Exception:
_log.exception('cannot interact with server')
=====================================
server/pycommon/gmTools.py
=====================================
@@ -958,7 +958,7 @@ def coalesce(value2test=None, return_instead=None, template4value=None, template
value = (template4instead % return_instead) or return_instead
else:
value = (template4value % value2test) or value2test
- print value
+ print(value)
@param value2test: the value to be tested for <None>
=====================================
server/sql/v21-v22/fixups/v22-release_notes-fixup.sql
=====================================
@@ -17,28 +17,22 @@ INSERT INTO dem.message_inbox (
) VALUES (
(select pk from dem.staff where db_user = 'any-doc'),
(select pk_type from dem.v_inbox_item_type where type = 'memo' and category = 'administrative'),
- 'Release Notes for GNUmed 1.8.3 (database v22.13)',
- 'GNUmed 1.8.3 Release Notes:
+ 'Release Notes for GNUmed 1.8.4 (database v22.14)',
+ 'GNUmed 1.8.4 Release Notes:
- 1.8.3
+ 1.8.4
-NEW: tool: fingerprint_db
+IMPROVED: exceptions: always include exception/traceback in mail
+IMPROVED: PACS: robustify DICOM upload
-IMPROVED: forms: log pdflatex version
+FIX: placeholders: exception on parsing some option styles
+FIX: address: nominatim.openstreetmap.org API has changed
+FIX: documents: properly wipe details display between patients
-FIX: meds: drug data source selection [thanks bganglia892]
-FIX: meds: ADR URL configuration [thanks bganglia892]
-FIX: vaccs: ADR URL configuration [thanks bganglia892]
-FIX: tests: LOINC import fixup [thanks bganglia892]
-FIX: db: whitespace in connection parameters [thanks kikiruz]
-FIX: startup: startup without console fails [thanks Marc]
-FIX: top panel: incorrect age-at-birthday display
-FIX: i18n: locale activation
+ 22.14
- 22.13
-
-IMPROVED: bootstrapper logging
+FIX: bootstrapper exception calling capture_conn_state()
');
-- --------------------------------------------------------------
-select gm.log_script_insertion('v22-release_notes-fixup.sql', '22.13 at 1.8.3');
+select gm.log_script_insertion('v22-release_notes-fixup.sql', '22.14 at 1.8.4');
View it on GitLab: https://salsa.debian.org/med-team/gnumed-server/-/compare/3700d97352a66ac4ba41a3450fadc5e9935a6c05...278fb1fe205715deaddda5a35540c2b2d49d8911
--
View it on GitLab: https://salsa.debian.org/med-team/gnumed-server/-/compare/3700d97352a66ac4ba41a3450fadc5e9935a6c05...278fb1fe205715deaddda5a35540c2b2d49d8911
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