Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
fea2bdd3 by Andreas Tille at 2020-11-14T13:45:28+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,16 +1,16 @@
-Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
+Last-Update: Sat, 14 Nov 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 174 | {imaging,covid-19} |
- orthanc | 93 | {imaging,covid-19,practice} |
- orthanc-wsi | 51 | {practice,laboratory,imaging,covid-19,oncology,his} |
- gdcm | 33 | {imaging-dev} |
- htsjdk | 28 | {bio-dev} |
- dicomscope | 27 | {imaging} |
+ dcmtk | 178 | {imaging,covid-19} |
+ orthanc | 94 | {imaging,covid-19,practice} |
+ orthanc-wsi | 49 | {practice,laboratory,imaging,covid-19,oncology,his} |
+ gdcm | 37 | {imaging-dev} |
+ htsjdk | 27 | {bio-dev} |
dicom3tools | 26 | {imaging} |
- gdcm | 23 | {imaging,covid-19} |
- dcm2niix | 22 | {imaging} |
+ dicomscope | 25 | {imaging} |
+ gdcm | 25 | {imaging,covid-19} |
+ dcm2niix | 24 | {imaging} |
gnumed-server | 18 | {practice,covid-19} |
gdcm | 16 | {imaging-dev} |
invesalius | 16 | {imaging} |
@@ -18,21 +18,22 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
biosig | 14 | {physics,imaging} |
minc-tools | 14 | {imaging} |
nifticlib | 14 | {imaging} |
+ ngs-sdk | 13 | {bio-dev} |
openslide | 13 | {imaging} |
+ adun.app | 12 | {bio} |
+ ngs-sdk | 12 | {bio-dev} |
plastimatch | 12 | {imaging} |
vtk-dicom | 12 | {imaging} |
- adun.app | 11 | {bio} |
- ngs-sdk | 11 | {bio-dev} |
- king | 10 | {imaging,typesetting} |
- ngs-sdk | 10 | {bio-dev} |
- obitools | 10 | {bio} |
+ king | 11 | {imaging,typesetting} |
nifticlib | 9 | {imaging-dev} |
+ obitools | 9 | {bio} |
insighttoolkit4 | 8 | {imaging-dev} |
+ pymia | 8 | {imaging-dev} |
orthanc-webviewer | 7 | {imaging} |
- pymia | 7 | {imaging-dev} |
+ seqsero | 7 | {bio} |
+ dicompyler | 6 | {oncology} |
ea-utils | 6 | {bio} |
melting | 6 | {cloud,bio} |
- seqsero | 6 | {bio} |
treeview | 6 | {bio,bio-phylogeny} |
bamkit | 5 | {bio,covid-19} |
bart-view | 5 | {imaging} |
@@ -42,18 +43,20 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
librg-utils-perl | 5 | {bio} |
multiqc | 5 | {covid-19,bio} |
rambo-k | 5 | {bio} |
+ staden | 5 | {bio} |
+ alter-sequence-alignment | 4 | {bio} |
biomaj3-daemon | 4 | {bio} |
bio-tradis | 4 | {bio-dev,bio} |
- dicompyler | 4 | {oncology} |
lagan | 4 | {bio} |
+ libsbml | 4 | {bio-dev} |
mipe | 4 | {cloud,bio} |
mrs | 4 | {bio} |
+ ngs-sdk | 4 | {bio-dev} |
orthanc-dicomweb | 4 | {imaging,covid-19} |
phyutility | 4 | {cloud,bio} |
sibsim4 | 4 | {cloud,bio} |
stacks | 4 | {bio} |
tracetuner | 4 | {bio} |
- alter-sequence-alignment | 3 | {bio} |
anfo | 3 | {cloud,bio} |
arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
@@ -72,31 +75,31 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
libncl | 3 | {bio} |
- libsbml | 3 | {bio-dev} |
+ libpal-java | 3 | {bio-dev} |
murasaki | 3 | {bio} |
- ngs-sdk | 3 | {bio-dev} |
orthanc-mysql | 3 | {imaging} |
orthanc-postgresql | 3 | {imaging} |
phast | 3 | {bio} |
phybin | 3 | {bio} |
predictprotein | 3 | {bio} |
prime-phylo | 3 | {cloud,bio} |
+ prottest | 3 | {bio-phylogeny,bio} |
quorum | 3 | {bio} |
saint | 3 | {bio} |
- sight | 3 | {imaging} |
spaced | 3 | {bio} |
- staden | 3 | {bio} |
yaha | 3 | {bio} |
zalign | 3 | {cloud,bio} |
atropos | 2 | {bio} |
brig | 2 | {bio} |
canu | 2 | {bio} |
cat-bat | 2 | {covid-19,bio} |
+ ctn | 2 | {imaging-dev} |
delly | 2 | {covid-19,bio} |
dindel | 2 | {bio} |
ecopcr | 2 | {bio} |
embassy-domsearch | 2 | {cloud,bio} |
emboss-explorer | 2 | {bio} |
+ emmax | 2 | {bio} |
fastml | 2 | {bio} |
fsm-lite | 2 | {bio} |
gatb-core | 2 | {bio} |
@@ -104,7 +107,6 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
jmodeltest | 2 | {bio,bio-phylogeny} |
libdivsufsort | 2 | {bio-dev} |
libminc | 2 | {imaging-dev} |
- libpal-java | 2 | {bio-dev} |
librdp-taxonomy-tree-java | 2 | {bio-dev} |
logol | 2 | {bio} |
mauve-aligner | 2 | {bio} |
@@ -113,14 +115,15 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
microbegps | 2 | {bio} |
nanosv | 2 | {covid-19,bio} |
neobio | 2 | {cloud,bio} |
+ opencfu | 2 | {laboratory} |
openslide | 2 | {imaging-dev} |
+ papyrus | 2 | {imaging-dev} |
paraclu | 2 | {bio,cloud} |
perm | 2 | {bio,cloud} |
piler | 2 | {bio} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
proalign | 2 | {bio-phylogeny,bio} |
- prottest | 2 | {bio-phylogeny,bio} |
pscan-chip | 2 | {bio} |
qcumber | 2 | {bio} |
rdp-alignment | 2 | {bio} |
@@ -132,6 +135,7 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
scrm | 2 | {bio} |
segemehl | 2 | {bio} |
sga | 2 | {bio} |
+ sight | 2 | {imaging} |
soapaligner | 2 | {bio} |
soapsnp | 2 | {bio} |
sprai | 2 | {bio} |
@@ -139,14 +143,11 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
surankco | 2 | {bio} |
trace2dbest | 2 | {bio} |
yanagiba | 2 | {bio,covid-19} |
- acedb | 1 | {bio,cloud} |
bbmap | 1 | {bio,covid-19} |
biosig | 1 | {physics,imaging-dev} |
bustools | 1 | {covid-19,bio} |
- ctn | 1 | {imaging-dev} |
cufflinks | 1 | {bio,cloud} |
dextractor | 1 | {bio,covid-19} |
- emmax | 1 | {bio} |
htscodecs | 1 | {covid-19,bio-dev} |
ipig | 1 | {bio} |
kmerresistance | 1 | {bio} |
@@ -154,10 +155,8 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
libctapimkt | 1 | {practice} |
libmuscle | 1 | {bio-dev} |
lighter | 1 | {covid-19,bio} |
- opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
oscar | 1 | {practice,tools,data} |
- papyrus | 1 | {imaging-dev} |
pbdagcon | 1 | {bio} |
pilercr | 1 | {bio} |
pplacer | 1 | {covid-19,bio-phylogeny,bio} |
@@ -173,6 +172,8 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
tvc | 1 | {bio} |
varscan | 1 | {covid-19,bio} |
vienna-rna | 1 | {covid-19,bio} |
+ vtk-dicom | 1 | {imaging-dev} |
+ acedb | 0 | {bio,cloud} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
biosig | 0 | {physics} |
@@ -237,7 +238,6 @@ Last-Update: Sat, 14 Nov 2020 01:42:04 +0000
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
varna | 0 | {bio} |
- vtk-dicom | 0 | {imaging-dev} |
mssstest | -1 | {tools} |
orthanc-python | -1 | {covid-19} |
svim | -1 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fea2bdd34b919fbeb06c42bc3f59579797962d4e
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fea2bdd34b919fbeb06c42bc3f59579797962d4e
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