[med-svn] [Git][med-team/artfastqgenerator][master] 6 commits: routine-update: Standards-Version: 4.5.0

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / artfastqgenerator


Commits:
daf053b8 by Andreas Tille at 2020-11-16T13:56:30+01:00
routine-update: Standards-Version: 4.5.0

- - - - -
aeb1860f by Andreas Tille at 2020-11-16T13:56:30+01:00
routine-update: debhelper-compat 13

- - - - -
30734e47 by Andreas Tille at 2020-11-16T13:56:32+01:00
routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g

- - - - -
9539c883 by Andreas Tille at 2020-11-16T13:56:33+01:00
routine-update: Add salsa-ci file

- - - - -
0e9d818c by Andreas Tille at 2020-11-16T13:56:33+01:00
routine-update: Rules-Requires-Root: no

- - - - -
e13b5538 by Andreas Tille at 2020-11-16T13:58:27+01:00
routine-update: Ready to upload to unstable

- - - - -


5 changed files:

- debian/changelog
- − debian/compat
- debian/control
- + debian/salsa-ci.yml
- debian/tests/run-unit-test


Changes:

=====================================
debian/changelog
=====================================
@@ -1,4 +1,4 @@
-artfastqgenerator (0.0.20150519-4) UNRELEASED; urgency=medium
+artfastqgenerator (0.0.20150519-4) unstable; urgency=medium
 
   [ Jelmer Vernooij ]
   * Use secure copyright file specification URI.
@@ -6,7 +6,14 @@ artfastqgenerator (0.0.20150519-4) UNRELEASED; urgency=medium
   [ Andrius Merkys ]
   * Fixing a typo in package description.
 
- -- Andrius Merkys <andrius.merkys at gmail.com>  Wed, 13 Mar 2019 09:13:11 -0400
+  [ Andreas Tille ]
+  * Standards-Version: 4.5.0 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Mon, 16 Nov 2020 13:56:42 +0100
 
 artfastqgenerator (0.0.20150519-3) unstable; urgency=medium
 


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -3,13 +3,14 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
                javahelper,
                default-jdk
-Standards-Version: 4.1.5
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/artfastqgenerator
 Vcs-Git: https://salsa.debian.org/med-team/artfastqgenerator.git
 Homepage: https://sourceforge.net/projects/artfastqgen/
+Rules-Requires-Root: no
 
 Package: artfastqgenerator
 Architecture: all


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/tests/run-unit-test
=====================================
@@ -1,11 +1,11 @@
 #!/bin/sh -e
 
 pkg=artfastqgenerator
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
-  trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
 fi
-cd $ADTTMP
+cd $AUTOPKGTEST_TMP
 cp -a /usr/share/doc/artfastqgenerator/examples/* .
 find . -name "*.gz" -exec gunzip \{\} \;
 $pkg -R miniReference.fasta -O C1 -S ">1" -E ">" -URQS true -SE true -F1 test1.fastq -F2 test2.fastq



View it on GitLab: https://salsa.debian.org/med-team/artfastqgenerator/-/compare/7bc7aa3e5bcc83891e9231428988ccb4fd842caf...e13b55388708083ea91bb231423f0431a4029bd8

-- 
View it on GitLab: https://salsa.debian.org/med-team/artfastqgenerator/-/compare/7bc7aa3e5bcc83891e9231428988ccb4fd842caf...e13b55388708083ea91bb231423f0431a4029bd8
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