[med-svn] [Git][med-team/njplot][master] 12 commits: routine-update: Standards-Version: 4.5.0
Andreas Tille
gitlab at salsa.debian.org
Mon Nov 16 14:40:49 GMT 2020
Andreas Tille pushed to branch master at Debian Med / njplot
Commits:
62cd0551 by Andreas Tille at 2020-11-16T13:56:45+01:00
routine-update: Standards-Version: 4.5.0
- - - - -
a8f605f8 by Andreas Tille at 2020-11-16T13:56:45+01:00
routine-update: debhelper-compat 13
- - - - -
cdffd487 by Andreas Tille at 2020-11-16T13:56:47+01:00
routine-update: Secure URI in copyright format
- - - - -
18cf9e42 by Andreas Tille at 2020-11-16T13:56:47+01:00
routine-update: Remove trailing whitespace in debian/changelog
- - - - -
b4b67f15 by Andreas Tille at 2020-11-16T13:56:47+01:00
routine-update: Remove trailing whitespace in debian/control
- - - - -
4fc5cbb4 by Andreas Tille at 2020-11-16T13:56:47+01:00
routine-update: Add salsa-ci file
- - - - -
06f7f0bf by Andreas Tille at 2020-11-16T13:56:47+01:00
routine-update: Rules-Requires-Root: no
- - - - -
0137f8c2 by Andreas Tille at 2020-11-16T13:56:48+01:00
Trim trailing whitespace.
Changes-By: lintian-brush
Fixes: lintian: trailing-whitespace
See-also: https://lintian.debian.org/tags/trailing-whitespace.html
- - - - -
2c0eca3f by Andreas Tille at 2020-11-16T13:56:58+01:00
Use secure URI in Homepage field.
Changes-By: lintian-brush
Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html
- - - - -
fbf2aec5 by Andreas Tille at 2020-11-16T15:35:23+01:00
Do not quoted placeholder in mailcap entry
- - - - -
46a9eb97 by Andreas Tille at 2020-11-16T15:36:07+01:00
Fix autopkgtest
- - - - -
556ce968 by Andreas Tille at 2020-11-16T15:37:56+01:00
Upload to unstable
- - - - -
8 changed files:
- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- debian/njplot.mime
- debian/rules
- + debian/salsa-ci.yml
- debian/tests/run-unit-test
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,18 @@
+njplot (2.4-9) unstable; urgency=medium
+
+ * Standards-Version: 4.5.0 (routine-update)
+ * debhelper-compat 13 (routine-update)
+ * Secure URI in copyright format (routine-update)
+ * Remove trailing whitespace in debian/changelog (routine-update)
+ * Remove trailing whitespace in debian/control (routine-update)
+ * Add salsa-ci file (routine-update)
+ * Rules-Requires-Root: no (routine-update)
+ * Trim trailing whitespace.
+ * Use secure URI in Homepage field.
+ * Do not quoted placeholder in mailcap entry
+
+ -- Andreas Tille <tille at debian.org> Mon, 16 Nov 2020 15:36:51 +0100
+
njplot (2.4-8) unstable; urgency=medium
* debhelper 11
@@ -61,7 +76,7 @@ njplot (2.4-2) unstable; urgency=low
as Vibrant has switched to Motif now that it's free. (Closes: #710205.)
* debian/rules: Contrive to pass hardened CPPFLAGS and LDFLAGS.
* Standards-Version: 3.9.4. (Already compliant.)
-
+
[ Charles Plessy ]
* debian/patches/fix-underlinking.patch (new): Explicitly link njplot and
unrooted against -lm for compatibility with strict linkers (as on Ubuntu)
@@ -227,7 +242,7 @@ njplot (0.20051109-1) unstable; urgency=low
njplot (0.20041129-2) unstable; urgency=low
- * According to the ncbi maintainer switched back from
+ * According to the ncbi maintainer switched back from
priority extra to optional because the package depends
now are adjusted
* Build-Depends now libvibrant6-dev | vibrant-dev
=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11
=====================================
debian/control
=====================================
@@ -4,12 +4,13 @@ Uploaders: Andreas Tille <tille at debian.org>,
Charles Plessy <plessy at debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
libvibrant6-dev
-Standards-Version: 4.1.5
+Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/njplot
Vcs-Git: https://salsa.debian.org/med-team/njplot.git
-Homepage: http://pbil.univ-lyon1.fr/software/njplot
+Homepage: https://pbil.univ-lyon1.fr/software/njplot
+Rules-Requires-Root: no
Package: njplot
Architecture: any
@@ -20,4 +21,4 @@ Description: phylogenetic tree drawing program
phylogenetic tree format (e.g., the format used by the Phylip package).
NJplot is especially convenient for rooting the unrooted trees
obtained from parsimony, distance or maximum likelihood tree-building
- methods.
+ methods.
=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Source: ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/njplot-2.4.tar.gz
Files: *
=====================================
debian/njplot.mime
=====================================
@@ -1,2 +1,2 @@
-text/x-clustalw-tree; njplot '%s'; description=Clustal W Phylogenetic Tree ; nametemplate=%s.phb
-chemical/njplot; njplot '%s' ; description=Phylogenetic Tree ; nametemplate=%s.phb
+text/x-clustalw-tree; njplot %s; description=Clustal W Phylogenetic Tree ; nametemplate=%s.phb
+chemical/njplot; njplot %s ; description=Phylogenetic Tree ; nametemplate=%s.phb
=====================================
debian/rules
=====================================
@@ -4,4 +4,3 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all
%:
dh $@
-
=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
=====================================
debian/tests/run-unit-test
=====================================
@@ -17,7 +17,7 @@ pkg="njplot"
cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP
cd $AUTOPKGTEST_TMP
-gunzip *.gz
+gunzip -r *
echo "TEST START"
View it on GitLab: https://salsa.debian.org/med-team/njplot/-/compare/356711a1a492a79fad95128f6bd354b9b1375a45...556ce968bf1af501c05cdd3a7b87a3f36ff4057c
--
View it on GitLab: https://salsa.debian.org/med-team/njplot/-/compare/356711a1a492a79fad95128f6bd354b9b1375a45...556ce968bf1af501c05cdd3a7b87a3f36ff4057c
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