[med-svn] [Git][med-team/alien-hunter][master] 9 commits: routine-update: Standards-Version: 4.5.1

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / alien-hunter


Commits:
77e24d66 by Andreas Tille at 2020-11-26T08:05:15+01:00
routine-update: Standards-Version: 4.5.1

- - - - -
3a7a6f14 by Andreas Tille at 2020-11-26T08:05:16+01:00
routine-update: debhelper-compat 13

- - - - -
7eec011a by Andreas Tille at 2020-11-26T08:05:21+01:00
routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g

- - - - -
ac5f91ad by Andreas Tille at 2020-11-26T08:05:21+01:00
routine-update: Add salsa-ci file

- - - - -
216c4d88 by Andreas Tille at 2020-11-26T08:05:21+01:00
routine-update: Rules-Requires-Root: no

- - - - -
851c9939 by Andreas Tille at 2020-11-26T08:05:29+01:00
Use secure URI in Homepage field.

Changes-By: lintian-brush
Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html

- - - - -
f1fa4cc6 by Andreas Tille at 2020-11-26T08:05:32+01:00
Refer to specific version of license GPL-2+.

Changes-By: lintian-brush
Fixes: lintian: copyright-refers-to-symlink-license
See-also: https://lintian.debian.org/tags/copyright-refers-to-symlink-license.html
Fixes: lintian: copyright-refers-to-versionless-license-file
See-also: https://lintian.debian.org/tags/copyright-refers-to-versionless-license-file.html

- - - - -
4f7b38f9 by Andreas Tille at 2020-11-26T08:05:33+01:00
Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright).

Changes-By: lintian-brush

- - - - -
406c6c1d by Andreas Tille at 2020-11-26T08:08:31+01:00
routine-update: Ready to upload to unstable

- - - - -


7 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/salsa-ci.yml
- debian/tests/run-unit-test
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,17 @@
+alien-hunter (1.7-8) unstable; urgency=medium
+
+  * Standards-Version: 4.5.1 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * Use secure URI in Homepage field.
+  * Refer to specific version of license GPL-2+.
+  * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
+    present in machine-readable debian/copyright).
+
+ -- Andreas Tille <tille at debian.org>  Thu, 26 Nov 2020 08:05:33 +0100
+
 alien-hunter (1.7-7) unstable; urgency=medium
 
   [ Steffen Moeller ]


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -3,13 +3,14 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
                libbiojava-java,
                default-jdk
-Standards-Version: 4.2.1
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/alien-hunter
 Vcs-Git: https://salsa.debian.org/med-team/alien-hunter.git
-Homepage: http://www.sanger.ac.uk/science/tools/alien-hunter
+Homepage: https://www.sanger.ac.uk/science/tools/alien-hunter
+Rules-Requires-Root: no
 
 Package: alien-hunter
 Architecture: all


=====================================
debian/copyright
=====================================
@@ -23,7 +23,7 @@ License: GPL-2+
  Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA.
  .
  On Debian GNU/Linux you can find these licenses under
- /usr/share/common-licenses/GPL
+ /usr/share/common-licenses/GPL-2
 
 Files: debian/*
 Copyright: 2009-2016 Andreas Tille <tille at debian.org>


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/tests/run-unit-test
=====================================
@@ -2,12 +2,12 @@
 
 pkg=alien-hunter
 
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
-  trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
 fi
-cd $ADTTMP
-cp -a /usr/share/doc/${pkg}/examples/* $ADTTMP
+cd $AUTOPKGTEST_TMP
+cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP
 find . -name "*.gz" -exec gunzip \{\} \;
 alien_hunter demoSeq.dna output
 echo "Passed"


=====================================
debian/upstream/metadata
=====================================
@@ -1,5 +1,3 @@
-Contact: George Vernikos <gsv at sanger.ac.uk>
-Name: Alien_hunter
 Reference:
  author: Vernikos, Georgios S. and Parkhill, Julian
  title: >



View it on GitLab: https://salsa.debian.org/med-team/alien-hunter/-/compare/e1da4da6ed46e172b557bc171bb48eb02a141f8a...406c6c1dcedea8db431d19bc8b8d3b9966971ff2

-- 
View it on GitLab: https://salsa.debian.org/med-team/alien-hunter/-/compare/e1da4da6ed46e172b557bc171bb48eb02a141f8a...406c6c1dcedea8db431d19bc8b8d3b9966971ff2
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