[med-svn] [Git][med-team/alien-hunter][master] 9 commits: routine-update: Standards-Version: 4.5.1
Andreas Tille
gitlab at salsa.debian.org
Thu Nov 26 07:29:27 GMT 2020
Andreas Tille pushed to branch master at Debian Med / alien-hunter
Commits:
77e24d66 by Andreas Tille at 2020-11-26T08:05:15+01:00
routine-update: Standards-Version: 4.5.1
- - - - -
3a7a6f14 by Andreas Tille at 2020-11-26T08:05:16+01:00
routine-update: debhelper-compat 13
- - - - -
7eec011a by Andreas Tille at 2020-11-26T08:05:21+01:00
routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g
- - - - -
ac5f91ad by Andreas Tille at 2020-11-26T08:05:21+01:00
routine-update: Add salsa-ci file
- - - - -
216c4d88 by Andreas Tille at 2020-11-26T08:05:21+01:00
routine-update: Rules-Requires-Root: no
- - - - -
851c9939 by Andreas Tille at 2020-11-26T08:05:29+01:00
Use secure URI in Homepage field.
Changes-By: lintian-brush
Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html
- - - - -
f1fa4cc6 by Andreas Tille at 2020-11-26T08:05:32+01:00
Refer to specific version of license GPL-2+.
Changes-By: lintian-brush
Fixes: lintian: copyright-refers-to-symlink-license
See-also: https://lintian.debian.org/tags/copyright-refers-to-symlink-license.html
Fixes: lintian: copyright-refers-to-versionless-license-file
See-also: https://lintian.debian.org/tags/copyright-refers-to-versionless-license-file.html
- - - - -
4f7b38f9 by Andreas Tille at 2020-11-26T08:05:33+01:00
Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright).
Changes-By: lintian-brush
- - - - -
406c6c1d by Andreas Tille at 2020-11-26T08:08:31+01:00
routine-update: Ready to upload to unstable
- - - - -
7 changed files:
- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/salsa-ci.yml
- debian/tests/run-unit-test
- debian/upstream/metadata
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,17 @@
+alien-hunter (1.7-8) unstable; urgency=medium
+
+ * Standards-Version: 4.5.1 (routine-update)
+ * debhelper-compat 13 (routine-update)
+ * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
+ * Add salsa-ci file (routine-update)
+ * Rules-Requires-Root: no (routine-update)
+ * Use secure URI in Homepage field.
+ * Refer to specific version of license GPL-2+.
+ * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
+ present in machine-readable debian/copyright).
+
+ -- Andreas Tille <tille at debian.org> Thu, 26 Nov 2020 08:05:33 +0100
+
alien-hunter (1.7-7) unstable; urgency=medium
[ Steffen Moeller ]
=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11
=====================================
debian/control
=====================================
@@ -3,13 +3,14 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
Uploaders: Andreas Tille <tille at debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
libbiojava-java,
default-jdk
-Standards-Version: 4.2.1
+Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/alien-hunter
Vcs-Git: https://salsa.debian.org/med-team/alien-hunter.git
-Homepage: http://www.sanger.ac.uk/science/tools/alien-hunter
+Homepage: https://www.sanger.ac.uk/science/tools/alien-hunter
+Rules-Requires-Root: no
Package: alien-hunter
Architecture: all
=====================================
debian/copyright
=====================================
@@ -23,7 +23,7 @@ License: GPL-2+
Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA.
.
On Debian GNU/Linux you can find these licenses under
- /usr/share/common-licenses/GPL
+ /usr/share/common-licenses/GPL-2
Files: debian/*
Copyright: 2009-2016 Andreas Tille <tille at debian.org>
=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
=====================================
debian/tests/run-unit-test
=====================================
@@ -2,12 +2,12 @@
pkg=alien-hunter
-if [ "$ADTTMP" = "" ] ; then
- ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
- trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+ AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+ trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
fi
-cd $ADTTMP
-cp -a /usr/share/doc/${pkg}/examples/* $ADTTMP
+cd $AUTOPKGTEST_TMP
+cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP
find . -name "*.gz" -exec gunzip \{\} \;
alien_hunter demoSeq.dna output
echo "Passed"
=====================================
debian/upstream/metadata
=====================================
@@ -1,5 +1,3 @@
-Contact: George Vernikos <gsv at sanger.ac.uk>
-Name: Alien_hunter
Reference:
author: Vernikos, Georgios S. and Parkhill, Julian
title: >
View it on GitLab: https://salsa.debian.org/med-team/alien-hunter/-/compare/e1da4da6ed46e172b557bc171bb48eb02a141f8a...406c6c1dcedea8db431d19bc8b8d3b9966971ff2
--
View it on GitLab: https://salsa.debian.org/med-team/alien-hunter/-/compare/e1da4da6ed46e172b557bc171bb48eb02a141f8a...406c6c1dcedea8db431d19bc8b8d3b9966971ff2
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