[med-svn] [Git][med-team/snap-aligner][master] 12 commits: routine-update: New upstream version

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / snap-aligner


Commits:
0440d525 by Michael R. Crusoe at 2020-11-28T15:36:09+01:00
routine-update: New upstream version

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1c04dae3 by Michael R. Crusoe at 2020-11-28T15:36:10+01:00
New upstream version 1.0.0+dfsg
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433ac828 by Michael R. Crusoe at 2020-11-28T15:36:12+01:00
Update upstream source from tag 'upstream/1.0.0+dfsg'

Update to upstream version '1.0.0+dfsg'
with Debian dir b9a9f947c4ba4212af9197dbbfa7173b8807a9d7
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f026a4f6 by Michael R. Crusoe at 2020-11-28T15:36:12+01:00
routine-update: Standards-Version: 4.5.1

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cd66cd78 by Michael R. Crusoe at 2020-11-28T17:21:02+01:00
Freshen patches.

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07b53e17 by Michael R. Crusoe at 2020-11-28T17:21:03+01:00
debian/docs: Update filename of the manual

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ba8501ae by Michael R. Crusoe at 2020-11-28T17:21:03+01:00
debian/control: try building on s390x and riscv64

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443d4bf5 by Michael R. Crusoe at 2020-11-28T17:21:04+01:00
adjust CFFLAGS setting

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9a1bfe35 by Michael R. Crusoe at 2020-11-28T17:21:04+01:00
hardening patch not needed

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797e66c5 by Michael R. Crusoe at 2020-11-28T17:21:05+01:00
update autopkgtest

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09ca9667 by Michael R. Crusoe at 2020-11-28T17:21:05+01:00
perms fix for examples

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b69b2529 by Michael R. Crusoe at 2020-11-28T17:32:06+01:00
document segfault

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9 changed files:

- .gitignore
- Makefile
- README.md
- + SNAPLib/AffineGap.cpp
- + SNAPLib/AffineGap.h
- + SNAPLib/AffineGapVectorized.cpp
- + SNAPLib/AffineGapVectorized.h
- SNAPLib/AlignerContext.cpp
- SNAPLib/AlignerContext.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/compare/dbd8ee1605499927403168286d444a4ee8728aec...b69b252998ec93bb3e82f20330f2da75465df0be

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View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/compare/dbd8ee1605499927403168286d444a4ee8728aec...b69b252998ec93bb3e82f20330f2da75465df0be
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