Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
2bd86aa5 by Andreas Tille at 2020-11-29T13:45:06+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,37 +1,39 @@
-Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
+Last-Update: Sun, 29 Nov 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 177 | {imaging,covid-19} |
- orthanc | 94 | {covid-19,imaging,practice} |
- orthanc-wsi | 47 | {his,oncology,imaging,laboratory,covid-19,practice} |
- gdcm | 36 | {imaging-dev} |
- htsjdk | 29 | {bio-dev} |
- dcm2niix | 21 | {imaging} |
- dicom3tools | 20 | {imaging} |
+ dcmtk | 181 | {imaging,covid-19} |
+ orthanc | 97 | {covid-19,imaging,practice} |
+ orthanc-wsi | 48 | {his,oncology,imaging,laboratory,covid-19,practice} |
+ gdcm | 37 | {imaging-dev} |
+ htsjdk | 27 | {bio-dev} |
+ dcm2niix | 22 | {imaging} |
+ dicom3tools | 21 | {imaging} |
gdcm | 20 | {covid-19,imaging} |
dicomscope | 19 | {imaging} |
gnumed-server | 18 | {covid-19,practice} |
- ngs-sdk | 16 | {bio-dev} |
- gdcm | 13 | {imaging-dev} |
- adun.app | 12 | {bio} |
- invesalius | 12 | {imaging} |
- minc-tools | 12 | {imaging} |
- nifticlib | 12 | {imaging} |
+ ngs-sdk | 17 | {bio-dev} |
+ adun.app | 14 | {bio} |
+ gdcm | 14 | {imaging-dev} |
+ invesalius | 13 | {imaging} |
+ minc-tools | 13 | {imaging} |
+ nifticlib | 13 | {imaging} |
+ nifticlib | 12 | {imaging-dev} |
ngs-sdk | 11 | {bio-dev} |
- nifticlib | 10 | {imaging-dev} |
+ plastimatch | 11 | {imaging} |
+ ngs-sdk | 10 | {bio-dev} |
openslide | 10 | {imaging} |
- plastimatch | 10 | {imaging} |
- ngs-sdk | 9 | {bio-dev} |
- pixelmed | 9 | {imaging} |
- biosig | 8 | {imaging,physics} |
- king | 8 | {imaging,typesetting} |
+ pixelmed | 10 | {imaging} |
+ biosig | 9 | {imaging,physics} |
+ insighttoolkit4 | 9 | {imaging-dev} |
+ king | 9 | {imaging,typesetting} |
+ vtk-dicom | 9 | {imaging} |
orthanc-webviewer | 8 | {imaging} |
- vtk-dicom | 8 | {imaging} |
- insighttoolkit4 | 7 | {imaging-dev} |
librg-utils-perl | 7 | {bio} |
multiqc | 7 | {bio,covid-19} |
+ bart-view | 6 | {imaging} |
biojava-live | 6 | {bio-dev} |
+ dicompyler | 6 | {oncology} |
ea-utils | 6 | {bio} |
jebl2 | 6 | {bio-dev} |
melting | 6 | {cloud,bio} |
@@ -39,11 +41,10 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
pymia | 6 | {imaging-dev} |
seqsero | 6 | {bio} |
treeview | 6 | {bio-phylogeny,bio} |
- bart-view | 5 | {imaging} |
- dicompyler | 5 | {oncology} |
elastix | 5 | {imaging} |
getdata | 5 | {bio} |
- libsbml | 5 | {bio-dev} |
+ libdivsufsort | 5 | {bio-dev} |
+ libminc | 5 | {imaging-dev} |
mrs | 5 | {bio} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
bamkit | 4 | {bio,covid-19} |
@@ -51,8 +52,7 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
bio-tradis | 4 | {bio-dev,bio} |
emboss-explorer | 4 | {bio} |
fastlink | 4 | {bio,cloud} |
- libdivsufsort | 4 | {bio-dev} |
- libminc | 4 | {imaging-dev} |
+ libsbml | 4 | {bio-dev} |
mipe | 4 | {bio,cloud} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
@@ -60,6 +60,7 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
rambo-k | 4 | {bio} |
salmon | 4 | {covid-19,bio} |
spread-phy | 4 | {bio,bio-phylogeny} |
+ stacks | 4 | {bio} |
staden | 4 | {bio} |
tracetuner | 4 | {bio} |
anfo | 3 | {bio,cloud} |
@@ -89,8 +90,8 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
runcircos-gui | 3 | {bio} |
saint | 3 | {bio} |
sibsim4 | 3 | {cloud,bio} |
+ sight | 3 | {imaging} |
spaced | 3 | {bio} |
- stacks | 3 | {bio} |
biosig | 2 | {physics,imaging-dev} |
brig | 2 | {bio} |
busco | 2 | {covid-19,bio} |
@@ -111,7 +112,6 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
mauve-aligner | 2 | {bio} |
mhap | 2 | {bio-ngs,bio} |
microbegps | 2 | {bio} |
- opencfu | 2 | {laboratory} |
oscar | 2 | {data,tools,practice} |
papyrus | 2 | {imaging-dev} |
pbdagcon | 2 | {bio} |
@@ -125,9 +125,10 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
rdp-classifier | 2 | {bio} |
rtax | 2 | {bio,cloud} |
samblaster | 2 | {covid-19,bio} |
+ samtools-legacy | 2 | {bio-dev} |
scrm | 2 | {bio} |
+ seqan | 2 | {bio-dev} |
sga | 2 | {bio} |
- sight | 2 | {imaging} |
soapaligner | 2 | {bio} |
soapsnp | 2 | {bio} |
sprai | 2 | {bio} |
@@ -167,16 +168,16 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
libqes | 1 | {bio-dev} |
libseqlib | 1 | {bio-dev} |
libstatgen | 1 | {bio-dev} |
+ libvistaio | 1 | {imaging-dev} |
nanosv | 1 | {covid-19,bio} |
ncbi-vdb | 1 | {bio-dev} |
+ opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
pbseqlib | 1 | {bio-dev} |
plasmidid | 1 | {bio,covid-19} |
plasmidseeker | 1 | {bio} |
- samtools-legacy | 1 | {bio-dev} |
segemehl | 1 | {bio} |
- seqan | 1 | {bio-dev} |
seq-gen | 1 | {bio} |
sift | 1 | {bio} |
simpleitk | 1 | {imaging-dev} |
@@ -205,7 +206,6 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
libmaus2 | 0 | {bio-dev,covid-19} |
libmialm | 0 | {imaging-dev} |
libpsortb | 0 | {bio-dev} |
- libvistaio | 0 | {imaging-dev} |
libxdf | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
@@ -220,8 +220,8 @@ Last-Update: Sun, 29 Nov 2020 01:42:04 +0000
pilercr | 0 | {bio} |
pique | 0 | {bio} |
pplacer | 0 | {bio-phylogeny,bio,covid-19} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {bio} |
q2templates | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2bd86aa5d0378b9760681f3d5f7d8df49e23ff4b
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2bd86aa5d0378b9760681f3d5f7d8df49e23ff4b
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20201129/3051e26c/attachment-0001.html>