Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
47a1b601 by Andreas Tille at 2020-10-08T13:45:45+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,51 +1,51 @@
-Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
+Last-Update: Thu, 08 Oct 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 162 | {imaging,covid-19} |
- orthanc | 84 | {practice,covid-19,imaging} |
- orthanc-wsi | 47 | {his,laboratory,covid-19,imaging,practice,oncology} |
+ dcmtk | 165 | {imaging,covid-19} |
+ orthanc | 85 | {practice,covid-19,imaging} |
+ orthanc-wsi | 48 | {his,laboratory,covid-19,imaging,practice,oncology} |
gdcm | 37 | {imaging-dev} |
dicom3tools | 30 | {imaging} |
- dicomscope | 26 | {imaging} |
- htsjdk | 22 | {bio-dev} |
- dcm2niix | 17 | {imaging} |
+ dicomscope | 27 | {imaging} |
+ htsjdk | 23 | {bio-dev} |
+ gdcm | 19 | {covid-19,imaging} |
+ dcm2niix | 18 | {imaging} |
gdcm | 17 | {imaging-dev} |
- gdcm | 17 | {covid-19,imaging} |
ngs-sdk | 17 | {bio-dev} |
gnumed-server | 16 | {covid-19,practice} |
invesalius | 15 | {imaging} |
nifticlib | 12 | {imaging-dev} |
pixelmed | 12 | {imaging} |
+ minc-tools | 11 | {imaging} |
nifticlib | 11 | {imaging} |
adun.app | 10 | {bio} |
+ biosig4c++ | 10 | {physics,imaging} |
insighttoolkit4 | 10 | {imaging-dev} |
- minc-tools | 10 | {imaging} |
- melting | 9 | {cloud,bio} |
+ melting | 10 | {cloud,bio} |
+ plastimatch | 10 | {imaging} |
+ vtk-dicom | 10 | {imaging} |
openslide | 9 | {imaging} |
- plastimatch | 9 | {imaging} |
- biosig4c++ | 8 | {physics,imaging} |
- ngs-sdk | 8 | {bio-dev} |
- vtk-dicom | 8 | {imaging} |
bart-view | 7 | {imaging} |
biojava-live | 7 | {bio-dev} |
dicompyler | 7 | {oncology} |
fastlink | 7 | {bio,cloud} |
+ king | 7 | {typesetting,imaging} |
+ librg-utils-perl | 7 | {bio} |
+ ngs-sdk | 7 | {bio-dev} |
orthanc-webviewer | 7 | {imaging} |
phyutility | 7 | {bio,cloud} |
sibsim4 | 7 | {bio,cloud} |
stacks | 7 | {bio} |
anfo | 6 | {cloud,bio} |
- elastix | 6 | {imaging} |
jebl2 | 6 | {bio-dev} |
- king | 6 | {typesetting,imaging} |
libncl | 6 | {bio} |
- librg-utils-perl | 6 | {bio} |
mipe | 6 | {cloud,bio} |
multiqc | 6 | {bio,covid-19} |
salmon | 6 | {covid-19,bio} |
treeview | 6 | {bio,bio-phylogeny} |
ea-utils | 5 | {bio} |
+ elastix | 5 | {imaging} |
embassy-domainatrix | 5 | {cloud,bio} |
embassy-domalign | 5 | {cloud,bio} |
embassy-domsearch | 5 | {cloud,bio} |
@@ -58,7 +58,6 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
perm | 5 | {cloud,bio} |
piler | 5 | {bio} |
pymia | 5 | {imaging-dev} |
- radiant | 5 | {bio} |
saint | 5 | {bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
staden | 5 | {bio} |
@@ -77,7 +76,9 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
nutsqlite | 4 | {tools} |
phybin | 4 | {bio} |
placnet | 4 | {bio} |
+ predictprotein | 4 | {bio} |
proalign | 4 | {bio,bio-phylogeny} |
+ radiant | 4 | {bio} |
rdp-classifier | 4 | {bio} |
rtax | 4 | {cloud,bio} |
samblaster | 4 | {covid-19,bio} |
@@ -109,14 +110,12 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
orthanc-postgresql | 3 | {imaging} |
phast | 3 | {bio} |
plasmidseeker | 3 | {bio} |
- predictprotein | 3 | {bio} |
prime-phylo | 3 | {cloud,bio} |
prottest | 3 | {bio,bio-phylogeny} |
pscan-chip | 3 | {bio} |
quorum | 3 | {bio} |
rambo-k | 3 | {bio} |
rdp-alignment | 3 | {bio} |
- relion | 3 | {bio} |
runcircos-gui | 3 | {bio} |
segemehl | 3 | {bio} |
sga | 3 | {bio} |
@@ -133,7 +132,7 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
logol | 2 | {bio} |
mrs | 2 | {bio} |
murasaki | 2 | {bio} |
- ncbi-vdb | 2 | {bio-dev} |
+ ngs-sdk | 2 | {bio-dev} |
opencfu | 2 | {laboratory} |
openslide | 2 | {imaging-dev} |
orthanc-mysql | 2 | {imaging} |
@@ -147,6 +146,7 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
simpleitk | 2 | {imaging-dev} |
surankco | 2 | {bio} |
trace2dbest | 2 | {bio} |
+ acedb | 1 | {cloud,bio} |
atropos | 1 | {bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
bio-tradis | 1 | {bio,bio-dev} |
@@ -162,21 +162,18 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
htscodecs | 1 | {covid-19,bio-dev} |
kmerresistance | 1 | {bio} |
libmaus2 | 1 | {covid-19,bio-dev} |
- libseqlib | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
murasaki | 1 | {bio} |
- ngs-sdk | 1 | {bio-dev} |
+ ncbi-vdb | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
oscar | 1 | {data,practice,tools} |
pbcopper | 1 | {bio-dev} |
pilercr | 1 | {bio} |
q2templates | 1 | {bio} |
- relion | 1 | {bio} |
sift | 1 | {bio} |
skesa | 1 | {bio} |
stringtie | 1 | {bio,covid-19} |
vienna-rna | 1 | {covid-19,bio} |
- acedb | 0 | {cloud,bio} |
bambamc | 0 | {bio-dev} |
bamkit | 0 | {covid-19,bio} |
bbmap | 0 | {covid-19,bio} |
@@ -212,6 +209,7 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
libncl | 0 | {bio-dev} |
libpsortb | 0 | {bio-dev} |
libqes | 0 | {bio-dev} |
+ libseqlib | 0 | {bio-dev} |
libstatgen | 0 | {bio-dev} |
libxdf | 0 | {imaging-dev} |
lighter | 0 | {covid-19,bio} |
@@ -226,8 +224,6 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
pbseqlib | 0 | {bio-dev} |
plasmidid | 0 | {bio,covid-19} |
pplacer | 0 | {covid-19,bio,bio-phylogeny} |
- relion | 0 | {bio} |
- relion | 0 | {bio-dev} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
scrappie | 0 | {covid-19,bio} |
@@ -247,5 +243,5 @@ Last-Update: Thu, 08 Oct 2020 01:42:04 +0000
orthanc-python | -1 | {covid-19} |
shovill | -1 | {bio,covid-19} |
sight | -1 | {imaging-dev} |
-(274 rows)
+(270 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/47a1b601009b7eda4531abba7cf93a8b54071a6a
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/47a1b601009b7eda4531abba7cf93a8b54071a6a
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