[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Mon Oct 12 14:45:22 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
f44c9697 by Andreas Tille at 2020-10-12T13:45:18+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
+Last-Update: Mon, 12 Oct 2020 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
@@ -6,46 +6,45 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  orthanc                       |     91 | {practice,imaging,covid-19}                         | 
  orthanc-wsi                   |     48 | {oncology,his,laboratory,practice,imaging,covid-19} | 
  gdcm                          |     36 | {imaging-dev}                                       | 
- dicom3tools                   |     30 | {imaging}                                           | 
+ dicom3tools                   |     31 | {imaging}                                           | 
  dicomscope                    |     25 | {imaging}                                           | 
- htsjdk                        |     23 | {bio-dev}                                           | 
- gdcm                          |     18 | {imaging-dev}                                       | 
- gdcm                          |     18 | {imaging,covid-19}                                  | 
+ htsjdk                        |     25 | {bio-dev}                                           | 
+ gdcm                          |     19 | {imaging,covid-19}                                  | 
+ dcm2niix                      |     17 | {imaging}                                           | 
+ gdcm                          |     17 | {imaging-dev}                                       | 
  gnumed-server                 |     17 | {covid-19,practice}                                 | 
- dcm2niix                      |     16 | {imaging}                                           | 
- invesalius                    |     16 | {imaging}                                           | 
- ngs-sdk                       |     16 | {bio-dev}                                           | 
- nifticlib                     |     13 | {imaging-dev}                                       | 
+ ngs-sdk                       |     17 | {bio-dev}                                           | 
+ invesalius                    |     15 | {imaging}                                           | 
+ nifticlib                     |     12 | {imaging-dev}                                       | 
  pixelmed                      |     12 | {imaging}                                           | 
- insighttoolkit4               |     11 | {imaging-dev}                                       | 
+ biosig4c++                    |     11 | {imaging,physics}                                   | 
  minc-tools                    |     11 | {imaging}                                           | 
+ nifticlib                     |     11 | {imaging}                                           | 
  plastimatch                   |     11 | {imaging}                                           | 
  adun.app                      |     10 | {bio}                                               | 
- biosig4c++                    |     10 | {imaging,physics}                                   | 
+ insighttoolkit4               |     10 | {imaging-dev}                                       | 
  melting                       |     10 | {cloud,bio}                                         | 
- nifticlib                     |     10 | {imaging}                                           | 
+ openslide                     |     10 | {imaging}                                           | 
  vtk-dicom                     |     10 | {imaging}                                           | 
- openslide                     |      9 | {imaging}                                           | 
+ king                          |      8 | {imaging,typesetting}                               | 
+ librg-utils-perl              |      8 | {bio}                                               | 
  ngs-sdk                       |      8 | {bio-dev}                                           | 
  bart-view                     |      7 | {imaging}                                           | 
  biojava-live                  |      7 | {bio-dev}                                           | 
  fastlink                      |      7 | {cloud,bio}                                         | 
- librg-utils-perl              |      7 | {bio}                                               | 
+ jebl2                         |      7 | {bio-dev}                                           | 
  orthanc-webviewer             |      7 | {imaging}                                           | 
  phyutility                    |      7 | {cloud,bio}                                         | 
  salmon                        |      7 | {bio,covid-19}                                      | 
  sibsim4                       |      7 | {bio,cloud}                                         | 
  stacks                        |      7 | {bio}                                               | 
+ staden                        |      7 | {bio}                                               | 
  anfo                          |      6 | {cloud,bio}                                         | 
  dicompyler                    |      6 | {oncology}                                          | 
- jebl2                         |      6 | {bio-dev}                                           | 
- king                          |      6 | {imaging,typesetting}                               | 
- libncl                        |      6 | {bio}                                               | 
  mipe                          |      6 | {cloud,bio}                                         | 
  multiqc                       |      6 | {bio,covid-19}                                      | 
  obitools                      |      6 | {bio}                                               | 
  pymia                         |      6 | {imaging-dev}                                       | 
- staden                        |      6 | {bio}                                               | 
  ea-utils                      |      5 | {bio}                                               | 
  elastix                       |      5 | {imaging}                                           | 
  embassy-domainatrix           |      5 | {bio,cloud}                                         | 
@@ -54,15 +53,19 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  gatb-core                     |      5 | {bio}                                               | 
  jellyfish1                    |      5 | {bio}                                               | 
  libdivsufsort                 |      5 | {bio-dev}                                           | 
+ libncl                        |      5 | {bio}                                               | 
  orthanc-dicomweb              |      5 | {imaging,covid-19}                                  | 
  paraclu                       |      5 | {cloud,bio}                                         | 
  perm                          |      5 | {cloud,bio}                                         | 
  piler                         |      5 | {bio}                                               | 
+ placnet                       |      5 | {bio}                                               | 
+ predictprotein                |      5 | {bio}                                               | 
  saint                         |      5 | {bio}                                               | 
  spread-phy                    |      5 | {bio-phylogeny,bio}                                 | 
  treeview                      |      5 | {bio-phylogeny,bio}                                 | 
  beast-mcmc                    |      4 | {bio,bio-phylogeny}                                 | 
  biomaj3-cli                   |      4 | {cloud}                                             | 
+ brig                          |      4 | {bio}                                               | 
  dindel                        |      4 | {bio}                                               | 
  ecopcr                        |      4 | {bio}                                               | 
  fastml                        |      4 | {bio}                                               | 
@@ -76,13 +79,10 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  neobio                        |      4 | {bio,cloud}                                         | 
  nutsqlite                     |      4 | {tools}                                             | 
  phybin                        |      4 | {bio}                                               | 
- placnet                       |      4 | {bio}                                               | 
- predictprotein                |      4 | {bio}                                               | 
  proalign                      |      4 | {bio,bio-phylogeny}                                 | 
  radiant                       |      4 | {bio}                                               | 
  rdp-classifier                |      4 | {bio}                                               | 
  rtax                          |      4 | {bio,cloud}                                         | 
- samblaster                    |      4 | {bio,covid-19}                                      | 
  scrm                          |      4 | {bio}                                               | 
  spaced                        |      4 | {bio}                                               | 
  sprai                         |      4 | {bio}                                               | 
@@ -93,7 +93,6 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  assemblytics                  |      3 | {bio}                                               | 
  biomaj3-daemon                |      3 | {bio}                                               | 
  bitseq                        |      3 | {bio}                                               | 
- brig                          |      3 | {bio}                                               | 
  clonalframeml                 |      3 | {bio,covid-19}                                      | 
  clonalorigin                  |      3 | {bio}                                               | 
  delly                         |      3 | {covid-19,bio}                                      | 
@@ -118,6 +117,7 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  rambo-k                       |      3 | {bio}                                               | 
  rdp-alignment                 |      3 | {bio}                                               | 
  runcircos-gui                 |      3 | {bio}                                               | 
+ samblaster                    |      3 | {bio,covid-19}                                      | 
  segemehl                      |      3 | {bio}                                               | 
  sga                           |      3 | {bio}                                               | 
  soapaligner                   |      3 | {bio}                                               | 
@@ -153,7 +153,6 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  cat-bat                       |      1 | {covid-19,bio}                                      | 
  conda-package-handling        |      1 | {bio,bio-dev}                                       | 
  ctn                           |      1 | {imaging-dev}                                       | 
- cufflinks                     |      1 | {bio,cloud}                                         | 
  embassy-phylip                |      1 | {cloud,bio}                                         | 
  emmax                         |      1 | {bio}                                               | 
  gatb-core                     |      1 | {bio-dev}                                           | 
@@ -184,6 +183,7 @@ Last-Update: Mon, 12 Oct 2020 01:42:03 +0000
  bustools                      |      0 | {covid-19,bio}                                      | 
  camp                          |      0 | {imaging-dev}                                       | 
  concurrentqueue               |      0 | {bio-dev}                                           | 
+ cufflinks                     |      0 | {bio,cloud}                                         | 
  dextractor                    |      0 | {covid-19,bio}                                      | 
  fis-gtm                       |      0 | {his}                                               | 
  intake                        |      0 | {bio,bio-dev}                                       | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f44c96978cee6d05df974fe1ef4fba4bd656d4fb

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f44c96978cee6d05df974fe1ef4fba4bd656d4fb
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