[med-svn] [Git][med-team/iqtree][master] 11 commits: routine-update: New upstream version

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / iqtree


Commits:
1bf057f7 by Andreas Tille at 2020-10-14T09:15:22+02:00
routine-update: New upstream version

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9a1972ed by Andreas Tille at 2020-10-14T09:15:23+02:00
New upstream version 2.0.7+dfsg
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fce4c438 by Andreas Tille at 2020-10-14T09:15:30+02:00
Update upstream source from tag 'upstream/2.0.7+dfsg'

Update to upstream version '2.0.7+dfsg'
with Debian dir 32918e1130e0d918e5319eddc1ed1e1168889df6
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feda1575 by Andreas Tille at 2020-10-14T09:15:30+02:00
routine-update: Standards-Version: 4.5.0

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00ec3d0a by Andreas Tille at 2020-10-14T09:15:31+02:00
routine-update: debhelper-compat 13

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3de24ab0 by Andreas Tille at 2020-10-14T09:15:35+02:00
routine-update: Add salsa-ci file

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324768da by Andreas Tille at 2020-10-14T09:15:35+02:00
routine-update: Rules-Requires-Root: no

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895ee1c4 by Andreas Tille at 2020-10-14T09:15:44+02:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

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0d583a65 by Andreas Tille at 2020-10-14T09:27:47+02:00
Build-Depends: libboost-dev

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8efb769e by Andreas Tille at 2020-10-14T10:46:49+02:00
Executables are now named iqtree2

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3dddae5c by Andreas Tille at 2020-10-14T11:15:24+02:00
TODO: Wait for upstream for answer to rename from iqtree to iqtree2

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10 changed files:

- CMakeLists.txt
- alignment/CMakeLists.txt
- alignment/alignment.cpp
- alignment/alignment.h
- alignment/pattern.cpp
- alignment/pattern.h
- alignment/superalignment.cpp
- alignment/superalignment.h
- + alignment/superalignmentunlinked.cpp
- + alignment/superalignmentunlinked.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/iqtree/-/compare/f24fc79b601ae043ff5247d5ce3cd7f18e00824b...3dddae5cfcf811616b23819bb9b82542ddd2a371

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View it on GitLab: https://salsa.debian.org/med-team/iqtree/-/compare/f24fc79b601ae043ff5247d5ce3cd7f18e00824b...3dddae5cfcf811616b23819bb9b82542ddd2a371
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