Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
2d3c29ef by Andreas Tille at 2020-10-15T13:45:38+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,57 +1,61 @@
-Last-Update: Thu, 15 Oct 2020 01:42:03 +0000
+Last-Update: Thu, 15 Oct 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 173 | {imaging,covid-19} |
+ dcmtk | 172 | {imaging,covid-19} |
orthanc | 90 | {practice,imaging,covid-19} |
orthanc-wsi | 48 | {oncology,his,laboratory,practice,imaging,covid-19} |
- gdcm | 37 | {imaging-dev} |
- dicom3tools | 32 | {imaging} |
+ gdcm | 40 | {imaging-dev} |
+ dicom3tools | 33 | {imaging} |
dicomscope | 27 | {imaging} |
- htsjdk | 25 | {bio-dev} |
+ htsjdk | 27 | {bio-dev} |
dcm2niix | 21 | {imaging} |
- gdcm | 19 | {imaging,covid-19} |
- gdcm | 19 | {imaging-dev} |
+ gdcm | 18 | {imaging,covid-19} |
+ gdcm | 18 | {imaging-dev} |
gnumed-server | 17 | {covid-19,practice} |
invesalius | 17 | {imaging} |
ngs-sdk | 16 | {bio-dev} |
- minc-tools | 13 | {imaging} |
- biosig4c++ | 12 | {imaging,physics} |
+ minc-tools | 14 | {imaging} |
+ biosig4c++ | 13 | {imaging,physics} |
+ pixelmed | 13 | {imaging} |
+ insighttoolkit4 | 12 | {imaging-dev} |
nifticlib | 12 | {imaging} |
nifticlib | 12 | {imaging-dev} |
- pixelmed | 12 | {imaging} |
+ adun.app | 11 | {bio} |
plastimatch | 11 | {imaging} |
- adun.app | 10 | {bio} |
- insighttoolkit4 | 10 | {imaging-dev} |
melting | 10 | {cloud,bio} |
ngs-sdk | 10 | {bio-dev} |
openslide | 10 | {imaging} |
vtk-dicom | 10 | {imaging} |
+ librg-utils-perl | 9 | {bio} |
+ biojava-live | 8 | {bio-dev} |
king | 8 | {imaging,typesetting} |
- librg-utils-perl | 8 | {bio} |
+ anfo | 7 | {cloud,bio} |
bart-view | 7 | {imaging} |
- biojava-live | 7 | {bio-dev} |
fastlink | 7 | {cloud,bio} |
jebl2 | 7 | {bio-dev} |
+ obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
phyutility | 7 | {cloud,bio} |
salmon | 7 | {bio,covid-19} |
sibsim4 | 7 | {bio,cloud} |
stacks | 7 | {bio} |
- anfo | 6 | {cloud,bio} |
+ dicompyler | 6 | {oncology} |
+ ea-utils | 6 | {bio} |
+ embassy-domalign | 6 | {bio,cloud} |
+ gatb-core | 6 | {bio} |
mipe | 6 | {cloud,bio} |
multiqc | 6 | {bio,covid-19} |
- obitools | 6 | {bio} |
pymia | 6 | {imaging-dev} |
staden | 6 | {bio} |
- dicompyler | 5 | {oncology} |
- ea-utils | 5 | {bio} |
+ biomaj3-cli | 5 | {cloud} |
+ brig | 5 | {bio} |
+ ecopcr | 5 | {bio} |
elastix | 5 | {imaging} |
embassy-domainatrix | 5 | {bio,cloud} |
- embassy-domalign | 5 | {bio,cloud} |
embassy-domsearch | 5 | {bio,cloud} |
- gatb-core | 5 | {bio} |
jellyfish1 | 5 | {bio} |
+ lagan | 5 | {bio} |
libdivsufsort | 5 | {bio-dev} |
libncl | 5 | {bio} |
orthanc-dicomweb | 5 | {imaging,covid-19} |
@@ -63,21 +67,24 @@ Last-Update: Thu, 15 Oct 2020 01:42:03 +0000
saint | 5 | {bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
treeview | 5 | {bio-phylogeny,bio} |
+ alter-sequence-alignment | 4 | {bio} |
+ arden | 4 | {bio,cloud} |
+ assemblytics | 4 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
- biomaj3-cli | 4 | {cloud} |
- brig | 4 | {bio} |
+ clonalorigin | 4 | {bio} |
dindel | 4 | {bio} |
- ecopcr | 4 | {bio} |
+ estscan | 4 | {bio} |
fastml | 4 | {bio} |
fsm-lite | 4 | {bio} |
ghmm | 4 | {bio} |
ipig | 4 | {bio} |
- lagan | 4 | {bio} |
librdp-taxonomy-tree-java | 4 | {bio-dev} |
libsbml | 4 | {bio-dev} |
mauve-aligner | 4 | {bio} |
mhap | 4 | {bio,bio-ngs} |
+ microbegps | 4 | {bio} |
neobio | 4 | {bio,cloud} |
+ phast | 4 | {bio} |
phybin | 4 | {bio} |
proalign | 4 | {bio,bio-phylogeny} |
radiant | 4 | {bio} |
@@ -88,26 +95,22 @@ Last-Update: Thu, 15 Oct 2020 01:42:03 +0000
sprai | 4 | {bio} |
suitename | 4 | {bio} |
tracetuner | 4 | {bio} |
- alter-sequence-alignment | 3 | {bio} |
- arden | 3 | {bio,cloud} |
- assemblytics | 3 | {bio} |
+ yaha | 4 | {bio} |
+ zalign | 4 | {bio,cloud} |
biomaj3-daemon | 3 | {bio} |
bitseq | 3 | {bio} |
clonalframeml | 3 | {bio,covid-19} |
- clonalorigin | 3 | {bio} |
delly | 3 | {covid-19,bio} |
- estscan | 3 | {bio} |
getdata | 3 | {bio} |
hinge | 3 | {bio} |
jmodeltest | 3 | {bio,bio-phylogeny} |
lamarc | 3 | {bio} |
+ libminc | 3 | {imaging-dev} |
libpal-java | 3 | {bio-dev} |
metaphlan2 | 3 | {bio} |
- microbegps | 3 | {bio} |
mrs | 3 | {bio} |
nutsqlite | 3 | {tools} |
orthanc-postgresql | 3 | {imaging} |
- phast | 3 | {bio} |
plasmidseeker | 3 | {bio} |
prime-phylo | 3 | {cloud,bio} |
prottest | 3 | {bio-phylogeny,bio} |
@@ -122,16 +125,16 @@ Last-Update: Thu, 15 Oct 2020 01:42:03 +0000
sight | 3 | {imaging} |
soapaligner | 3 | {bio} |
soapsnp | 3 | {bio} |
+ surankco | 3 | {bio} |
tvc | 3 | {bio} |
- yaha | 3 | {bio} |
- zalign | 3 | {bio,cloud} |
+ bio-tradis | 2 | {bio,bio-dev} |
blasr | 2 | {bio-ngs,bio} |
busco | 2 | {covid-19,bio} |
emboss-explorer | 2 | {bio} |
- libminc | 2 | {imaging-dev} |
logol | 2 | {bio} |
murasaki | 2 | {bio} |
opencfu | 2 | {laboratory} |
+ openslide | 2 | {imaging-dev} |
orthanc-mysql | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
pbdagcon | 2 | {bio} |
@@ -140,13 +143,11 @@ Last-Update: Thu, 15 Oct 2020 01:42:03 +0000
seqan | 2 | {bio-dev} |
seqsero | 2 | {bio} |
simpleitk | 2 | {imaging-dev} |
- surankco | 2 | {bio} |
trace2dbest | 2 | {bio} |
acedb | 1 | {bio,cloud} |
atropos | 1 | {bio} |
- biosig4c++ | 1 | {physics,imaging-dev} |
biosig4c++ | 1 | {imaging-dev,physics} |
- bio-tradis | 1 | {bio,bio-dev} |
+ biosig4c++ | 1 | {physics,imaging-dev} |
blimps | 1 | {bio} |
canu | 1 | {bio} |
cat-bat | 1 | {covid-19,bio} |
@@ -163,7 +164,6 @@ Last-Update: Thu, 15 Oct 2020 01:42:03 +0000
murasaki | 1 | {bio} |
ncbi-vdb | 1 | {bio-dev} |
ngs-sdk | 1 | {bio-dev} |
- openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
oscar | 1 | {practice,data,tools} |
pbcopper | 1 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2d3c29efe9fc0dc00e47a1e354184505c456dd59
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2d3c29efe9fc0dc00e47a1e354184505c456dd59
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