[med-svn] [Git][med-team/bbmap][master] 4 commits: routine-update: New upstream version

[Nilesh Patra]

Nilesh Patra pushed to branch master at Debian Med / bbmap


Commits:
bf4bce2d by Nilesh Patra at 2020-10-16T18:38:04+05:30
routine-update: New upstream version

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4a48500e by Nilesh Patra at 2020-10-16T18:38:05+05:30
New upstream version 38.87+dfsg
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26a9d950 by Nilesh Patra at 2020-10-16T18:38:14+05:30
Update upstream source from tag 'upstream/38.87+dfsg'

Update to upstream version '38.87+dfsg'
with Debian dir 43b455c1f4a56a75d1dbebee862c850d437359ff
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b8ffc900 by Nilesh Patra at 2020-10-16T18:38:32+05:30
routine-update: Ready to upload to unstable

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26 changed files:

- README.md
- callvariants.sh
- current/align2/MSA.java
- current/hmm/HMMSearchLine.java
- current/hmm/HMMSearchReport.java
- + current/hmm/ProteinSummary.java
- current/icecream/IceCreamFinder.java
- current/icecream/IceCreamMaker.java
- current/icecream/ReformatPacBio.java
- current/icecream/ZMW.java
- current/icecream/ZMWStreamer.java
- + current/jasper/Comparison.java
- + current/jasper/DenseSimilarityMatrix.java
- + current/jasper/DenseTree.java
- + current/jasper/DenseTreeValidate.java
- + current/jasper/NCBIComparison.java
- + current/jasper/NCBISparseSimilarityMatrix.java
- + current/jasper/NCBISparseTree.java
- + current/jasper/NCBISparseTreeValidate.java
- + current/jasper/NCBITreeNode.java
- + current/jasper/Organism.java
- + current/jasper/SimilarityMatrix.java
- + current/jasper/SparseSimilarityMatrix.java
- + current/jasper/SparseTree.java
- + current/jasper/SparseTreeValidate.java
- + current/jasper/TaxCompare.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/875bbac0612183cd24e1d1b3a783c44b3f612da7...b8ffc900fcdc004876c80c1cacf9acfd2dd022a2

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View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/875bbac0612183cd24e1d1b3a783c44b3f612da7...b8ffc900fcdc004876c80c1cacf9acfd2dd022a2
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