Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
68a5854f by Andreas Tille at 2020-10-17T13:45:49+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,26 +1,26 @@
-Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
+Last-Update: Sat, 17 Oct 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 176 | {imaging,covid-19} |
- orthanc | 91 | {practice,imaging,covid-19} |
+ dcmtk | 178 | {imaging,covid-19} |
+ orthanc | 93 | {practice,imaging,covid-19} |
orthanc-wsi | 49 | {oncology,his,laboratory,practice,imaging,covid-19} |
- gdcm | 40 | {imaging-dev} |
+ gdcm | 39 | {imaging-dev} |
dicom3tools | 33 | {imaging} |
dicomscope | 29 | {imaging} |
- htsjdk | 28 | {bio-dev} |
- dcm2niix | 21 | {imaging} |
+ htsjdk | 29 | {bio-dev} |
+ dcm2niix | 22 | {imaging} |
gdcm | 20 | {imaging,covid-19} |
- gdcm | 19 | {imaging-dev} |
+ gdcm | 18 | {imaging-dev} |
+ ngs-sdk | 18 | {bio-dev} |
gnumed-server | 17 | {covid-19,practice} |
- invesalius | 17 | {imaging} |
- ngs-sdk | 17 | {bio-dev} |
+ invesalius | 16 | {imaging} |
+ biosig4c++ | 14 | {imaging,physics} |
minc-tools | 14 | {imaging} |
- biosig4c++ | 13 | {imaging,physics} |
+ nifticlib | 14 | {imaging-dev} |
insighttoolkit4 | 13 | {imaging-dev} |
- nifticlib | 13 | {imaging-dev} |
+ pixelmed | 13 | {imaging} |
adun.app | 12 | {bio} |
- pixelmed | 12 | {imaging} |
plastimatch | 11 | {imaging} |
melting | 10 | {cloud,bio} |
ngs-sdk | 10 | {bio-dev} |
@@ -29,15 +29,16 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
vtk-dicom | 10 | {imaging} |
librg-utils-perl | 9 | {bio} |
biojava-live | 8 | {bio-dev} |
+ dicompyler | 8 | {oncology} |
jebl2 | 8 | {bio-dev} |
king | 8 | {imaging,typesetting} |
anfo | 7 | {cloud,bio} |
bart-view | 7 | {imaging} |
- dicompyler | 7 | {oncology} |
fastlink | 7 | {cloud,bio} |
obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
sibsim4 | 7 | {bio,cloud} |
+ staden | 7 | {bio} |
ea-utils | 6 | {bio} |
embassy-domalign | 6 | {bio,cloud} |
embassy-domsearch | 6 | {bio,cloud} |
@@ -45,11 +46,10 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
mipe | 6 | {cloud,bio} |
multiqc | 6 | {bio,covid-19} |
phyutility | 6 | {cloud,bio} |
- pymia | 6 | {imaging-dev} |
salmon | 6 | {bio,covid-19} |
spread-phy | 6 | {bio-phylogeny,bio} |
stacks | 6 | {bio} |
- staden | 6 | {bio} |
+ alter-sequence-alignment | 5 | {bio} |
beast-mcmc | 5 | {bio,bio-phylogeny} |
biomaj3-cli | 5 | {cloud} |
brig | 5 | {bio} |
@@ -60,13 +60,14 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
lagan | 5 | {bio} |
libdivsufsort | 5 | {bio-dev} |
libncl | 5 | {bio} |
+ libsbml | 5 | {bio-dev} |
orthanc-dicomweb | 5 | {imaging,covid-19} |
paraclu | 5 | {cloud,bio} |
perm | 5 | {cloud,bio} |
predictprotein | 5 | {bio} |
+ pymia | 5 | {imaging-dev} |
saint | 5 | {bio} |
treeview | 5 | {bio-phylogeny,bio} |
- alter-sequence-alignment | 4 | {bio} |
arden | 4 | {bio,cloud} |
assemblytics | 4 | {bio} |
clonalorigin | 4 | {bio} |
@@ -78,7 +79,6 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
ipig | 4 | {bio} |
libminc | 4 | {imaging-dev} |
librdp-taxonomy-tree-java | 4 | {bio-dev} |
- libsbml | 4 | {bio-dev} |
mauve-aligner | 4 | {bio} |
mhap | 4 | {bio,bio-ngs} |
microbegps | 4 | {bio} |
@@ -90,6 +90,7 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
prime-phylo | 4 | {cloud,bio} |
proalign | 4 | {bio,bio-phylogeny} |
radiant | 4 | {bio} |
+ rambo-k | 4 | {bio} |
rdp-classifier | 4 | {bio} |
scrm | 4 | {bio} |
soapsnp | 4 | {bio} |
@@ -110,14 +111,15 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
murasaki | 3 | {bio} |
nutsqlite | 3 | {tools} |
orthanc-postgresql | 3 | {imaging} |
+ papyrus | 3 | {imaging-dev} |
pbdagcon | 3 | {bio} |
prottest | 3 | {bio-phylogeny,bio} |
quorum | 3 | {bio} |
- rambo-k | 3 | {bio} |
rdp-alignment | 3 | {bio} |
rtax | 3 | {bio,cloud} |
samblaster | 3 | {bio,covid-19} |
segemehl | 3 | {bio} |
+ seqsero | 3 | {bio} |
sga | 3 | {bio} |
sight | 3 | {imaging} |
suitename | 3 | {bio} |
@@ -129,29 +131,29 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
blasr | 2 | {bio-ngs,bio} |
busco | 2 | {covid-19,bio} |
clonalframeml | 2 | {bio,covid-19} |
+ ctn | 2 | {imaging-dev} |
emboss-explorer | 2 | {bio} |
logol | 2 | {bio} |
opencfu | 2 | {laboratory} |
openslide | 2 | {imaging-dev} |
orthanc-mysql | 2 | {imaging} |
- papyrus | 2 | {imaging-dev} |
+ oscar | 2 | {practice,data,tools} |
plasmidseeker | 2 | {bio} |
pscan-chip | 2 | {bio} |
qcumber | 2 | {bio} |
runcircos-gui | 2 | {bio} |
samtools-legacy | 2 | {bio-dev} |
seqan | 2 | {bio-dev} |
- seqsero | 2 | {bio} |
simpleitk | 2 | {imaging-dev} |
soapaligner | 2 | {bio} |
trace2dbest | 2 | {bio} |
+ bamkit | 1 | {covid-19,bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
biosig4c++ | 1 | {imaging-dev,physics} |
blimps | 1 | {bio} |
canu | 1 | {bio} |
cat-bat | 1 | {covid-19,bio} |
conda-package-handling | 1 | {bio,bio-dev} |
- ctn | 1 | {imaging-dev} |
embassy-phylip | 1 | {cloud,bio} |
emmax | 1 | {bio} |
gatb-core | 1 | {bio-dev} |
@@ -163,7 +165,6 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
ncbi-vdb | 1 | {bio-dev} |
ngs-sdk | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
- oscar | 1 | {practice,data,tools} |
pbcopper | 1 | {bio-dev} |
pilercr | 1 | {bio} |
q2templates | 1 | {bio} |
@@ -173,7 +174,6 @@ Last-Update: Sat, 17 Oct 2020 01:42:04 +0000
vienna-rna | 1 | {bio,covid-19} |
atropos | 0 | {bio} |
bambamc | 0 | {bio-dev} |
- bamkit | 0 | {covid-19,bio} |
bbmap | 0 | {covid-19,bio} |
biojava4-live | 0 | {bio-dev} |
biosig4c++ | 0 | {physics} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/68a5854f9ed674d1ca8449409d817d13be443685
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/68a5854f9ed674d1ca8449409d817d13be443685
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