Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
7dcf18b8 by Andreas Tille at 2020-10-27T13:45:14+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,57 +1,59 @@
-Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
+Last-Update: Tue, 27 Oct 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 173 | {covid-19,imaging} |
- orthanc | 92 | {practice,imaging,covid-19} |
- orthanc-wsi | 46 | {practice,covid-19,his,oncology,imaging,laboratory} |
- gdcm | 39 | {imaging-dev} |
+ dcmtk | 177 | {covid-19,imaging} |
+ orthanc | 95 | {practice,imaging,covid-19} |
+ orthanc-wsi | 47 | {practice,covid-19,his,oncology,imaging,laboratory} |
+ gdcm | 41 | {imaging-dev} |
htsjdk | 35 | {bio-dev} |
- dicom3tools | 32 | {imaging} |
- dicomscope | 31 | {imaging} |
- dcm2niix | 21 | {imaging} |
+ dicomscope | 34 | {imaging} |
+ dicom3tools | 33 | {imaging} |
+ dcm2niix | 22 | {imaging} |
+ gnumed-server | 18 | {practice,covid-19} |
gdcm | 17 | {imaging,covid-19} |
- gnumed-server | 17 | {practice,covid-19} |
gdcm | 15 | {imaging-dev} |
ngs-sdk | 15 | {bio-dev} |
biosig | 14 | {imaging,physics} |
invesalius | 14 | {imaging} |
minc-tools | 14 | {imaging} |
+ pixelmed | 13 | {imaging} |
nifticlib | 12 | {imaging} |
- pixelmed | 12 | {imaging} |
ngs-sdk | 11 | {bio-dev} |
- nifticlib | 10 | {imaging-dev} |
- adun.app | 9 | {bio} |
- insighttoolkit4 | 9 | {imaging-dev} |
+ nifticlib | 11 | {imaging-dev} |
+ adun.app | 10 | {bio} |
+ insighttoolkit4 | 10 | {imaging-dev} |
+ openslide | 10 | {imaging} |
king | 9 | {imaging,typesetting} |
librg-utils-perl | 9 | {bio} |
obitools | 9 | {bio} |
plastimatch | 9 | {imaging} |
vtk-dicom | 9 | {imaging} |
+ dicompyler | 8 | {oncology} |
melting | 8 | {bio,cloud} |
- openslide | 8 | {imaging} |
- staden | 8 | {bio} |
- dicompyler | 7 | {oncology} |
ea-utils | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
+ staden | 7 | {bio} |
biojava-live | 6 | {bio-dev} |
biomaj3-cli | 6 | {cloud} |
jebl2 | 6 | {bio-dev} |
multiqc | 6 | {covid-19,bio} |
- ngs-sdk | 6 | {bio-dev} |
predictprotein | 6 | {bio} |
pymia | 6 | {imaging-dev} |
stacks | 6 | {bio} |
- anfo | 5 | {bio,cloud} |
+ treeview | 6 | {bio,bio-phylogeny} |
bart-view | 5 | {imaging} |
+ elastix | 5 | {imaging} |
fastlink | 5 | {cloud,bio} |
lagan | 5 | {bio} |
+ libminc | 5 | {imaging-dev} |
mipe | 5 | {cloud,bio} |
+ ngs-sdk | 5 | {bio-dev} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
salmon | 5 | {bio,covid-19} |
sibsim4 | 5 | {bio,cloud} |
- treeview | 5 | {bio,bio-phylogeny} |
alter-sequence-alignment | 4 | {bio} |
+ anfo | 4 | {bio,cloud} |
assemblytics | 4 | {bio} |
beast-mcmc | 4 | {bio-phylogeny,bio} |
biomaj3-daemon | 4 | {bio} |
@@ -60,23 +62,23 @@ Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
clonalorigin | 4 | {bio} |
delly | 4 | {covid-19,bio} |
ecopcr | 4 | {bio} |
- elastix | 4 | {imaging} |
embassy-domalign | 4 | {cloud,bio} |
embassy-domsearch | 4 | {cloud,bio} |
estscan | 4 | {bio} |
gatb-core | 4 | {bio} |
jellyfish1 | 4 | {bio} |
+ lamarc | 4 | {bio} |
libdivsufsort | 4 | {bio-dev} |
- libminc | 4 | {imaging-dev} |
libncl | 4 | {bio} |
- libsbml | 4 | {bio-dev} |
mrs | 4 | {bio} |
phast | 4 | {bio} |
+ phybin | 4 | {bio} |
phyutility | 4 | {cloud,bio} |
piler | 4 | {bio} |
placnet | 4 | {bio} |
prime-phylo | 4 | {cloud,bio} |
rambo-k | 4 | {bio} |
+ saint | 4 | {bio} |
seqsero | 4 | {bio} |
soapsnp | 4 | {bio} |
spread-phy | 4 | {bio,bio-phylogeny} |
@@ -91,9 +93,10 @@ Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
embassy-domainatrix | 3 | {bio,cloud} |
fastml | 3 | {bio} |
fsm-lite | 3 | {bio} |
+ getdata | 3 | {bio} |
ghmm | 3 | {bio} |
hinge | 3 | {bio} |
- lamarc | 3 | {bio} |
+ libsbml | 3 | {bio-dev} |
mauve-aligner | 3 | {bio} |
mhap | 3 | {bio,bio-ngs} |
microbegps | 3 | {bio} |
@@ -102,14 +105,14 @@ Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
orthanc-mysql | 3 | {imaging} |
orthanc-postgresql | 3 | {imaging} |
paraclu | 3 | {cloud,bio} |
+ pbdagcon | 3 | {bio} |
perm | 3 | {cloud,bio} |
- phybin | 3 | {bio} |
plasmidseeker | 3 | {bio} |
pscan-chip | 3 | {bio} |
quorum | 3 | {bio} |
radiant | 3 | {bio} |
rtax | 3 | {bio,cloud} |
- saint | 3 | {bio} |
+ runcircos-gui | 3 | {bio} |
samblaster | 3 | {bio,covid-19} |
scrm | 3 | {bio} |
segemehl | 3 | {bio} |
@@ -119,12 +122,12 @@ Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
sprai | 3 | {bio} |
suitename | 3 | {bio} |
surankco | 3 | {bio} |
+ zalign | 3 | {bio,cloud} |
acedb | 2 | {bio,cloud} |
atropos | 2 | {bio} |
canu | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
emmax | 2 | {bio} |
- getdata | 2 | {bio} |
ipig | 2 | {bio} |
jmodeltest | 2 | {bio,bio-phylogeny} |
kmerresistance | 2 | {bio} |
@@ -133,21 +136,17 @@ Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
logol | 2 | {bio} |
nutsqlite | 2 | {tools} |
oscar | 2 | {data,practice,tools} |
- papyrus | 2 | {imaging-dev} |
- pbdagcon | 2 | {bio} |
pilercr | 2 | {bio} |
proalign | 2 | {bio,bio-phylogeny} |
prottest | 2 | {bio-phylogeny,bio} |
qcumber | 2 | {bio} |
rdp-alignment | 2 | {bio} |
rdp-classifier | 2 | {bio} |
- runcircos-gui | 2 | {bio} |
sga | 2 | {bio} |
skesa | 2 | {bio} |
stringtie | 2 | {covid-19,bio} |
trace2dbest | 2 | {bio} |
tvc | 2 | {bio} |
- zalign | 2 | {bio,cloud} |
bbmap | 1 | {bio,covid-19} |
biosig | 1 | {physics,imaging-dev} |
blasr | 1 | {bio,bio-ngs} |
@@ -164,6 +163,7 @@ Last-Update: Tue, 27 Oct 2020 01:42:04 +0000
metaphlan2 | 1 | {bio} |
nanosv | 1 | {bio,covid-19} |
opensurgsim | 1 | {imaging-dev} |
+ papyrus | 1 | {imaging-dev} |
pique | 1 | {bio} |
plasmidid | 1 | {covid-19,bio} |
pplacer | 1 | {bio,bio-phylogeny,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7dcf18b81337cee9bbe7f4c1d9070bc3f9969662
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7dcf18b81337cee9bbe7f4c1d9070bc3f9969662
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