[med-svn] [Git][med-team/simrisc][master] Ready for simrisc 13.03.00-1

Fri Oct 30 13:49:36 GMT 2020


Frank B. Brokken pushed to branch master at Debian Med / simrisc


Commits:
18cc6a77 by Frank B. Brokken at 2020-10-30T08:54:53+01:00
Ready for simrisc 13.03.00-1

- - - - -


4 changed files:

- debian/changelog
- − debian/patches/manpage-typo.patch
- debian/patches/series
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+simrisc (13.03.00-1) unstable; urgency=low
+
+  * New upstream release repairs errors inherited from the original program
+    and standardizes the way Modalities are handled. The simrisc configuration
+    file received several modification, which are covered by the
+    simriscparams(7) man-page.
+
+ -- Frank B. Brokken <f.b.brokken at rug.nl>  Tue, 27 Oct 2020 20:06:38 +0100
+
 simrisc (13.02.01-3) UNRELEASED; urgency=medium
 
   * Fix debian/watch for new GitLab listing archives format


=====================================
debian/patches/manpage-typo.patch deleted
=====================================
@@ -1,11 +0,0 @@
---- a/documentation/man/simrisc.yo
-+++ b/documentation/man/simrisc.yo
-@@ -224,7 +224,7 @@
- tt(/tmp/data), simulating 1000 cases, and 20 for seeding the random number
- generator the command
-     verb(
--simrisc -o -d /tmp/data nWomen: 1000, seed: 20
-+simrisc -o -D /tmp/data nWomen: 1000, seed: 20
-     )
-     can be issued.
- 


=====================================
debian/patches/series
=====================================
@@ -1 +0,0 @@
-manpage-typo.patch


=====================================
debian/upstream/metadata
=====================================
@@ -1,4 +1,64 @@
 Reference:
+ - Author: >
+     Du Y and Sidorenkov G and Heuvelmans MA and Groen HJM and Vermeulen KM
+     and Greuter MJW and de Bock GH 
+   Title: >
+     Cost-effectiveness of lung cancer screening with low-dose computed
+     tomography in heavy smokers: a microsimulation modelling study
+   Journal: Breast
+   Year: 2020
+   Volume: 135
+   Pages: 121-129
+   DOI: 10.1016/j.ejca.2020.05.004
+   PMID: 32563896
+   URL: https://www.ejcancer.com/article/S0959-8049(20)30265-3/fulltext
+   eprint: https://www.ejcancer.com/action/showPdf?pii=S0959-8049%2820%2930265-3
+ - Author: >
+     Wang J and Phi XA and Greuter MJW and Daszczuk AM and Feenstra TL and
+     Pijnappel RM and Vermeulen KM and Buls N and Houssami N and Lu W and de
+     Bock GH 
+   Title: >
+     The cost-effectiveness of digital breast tomosynthesis in a population
+     breast cancer screening program 
+   Journal: European Radiology
+   Year: 2020
+   Volume: 30
+   Number: 10
+   Pages: 5437-45
+   DOI: 10.1007/s00330-020-06812-x
+   PMID: 32382844
+   PMCID: PMC7476964
+   URL: https://link.springer.com/article/10.1007/s00330-020-06812-x
+   eprint: https://link.springer.com/content/pdf/10.1007/s00330-020-06812-x.pdf
+ - Author: >
+     Phi XA and Greuter MJW and Obdeijn IM and Oosterwijk JC and Feenstra TL
+     and Houssami N and de Bock GH 
+   Title: >
+     Should women with a BRCA1/2 mutation aged 60 and older be offered
+     intensified breast cancer screening? - A cost-effectiveness analysis 
+   Journal: Breast
+   Year: 2019
+   Volume: 45
+   Pages: 82-88
+   DOI: 10.1016/j.breast.2019.03.004
+   PMID: 30904701
+   URL: https://www.thebreastonline.com/article/S0960-9776(19)30043-8/fulltext
+   eprint: https://www.thebreastonline.com/action/showPdf?pii=S0960-9776%2819%2930043-8 
+ - Author: >
+     Koleva-Kolarova RG and Daszczuk AM and de Jonge C and Abu Hantash MK and
+     Zhan ZZ and Postema EJ and Feenstra TL and Pijnappel RM and Greuter MJW
+     and de Bock GH  
+   Title: >
+     A modelling study to evaluate the costs and effects of lowering the
+     starting age of population breast cancer screening 
+   Journal: Maturitas
+   Year: 2018 
+   Volume: 109
+   Pages: 81-88
+   DOI: 10.1016/j.maturitas.2017.12.009
+   PMID: 29452787
+   URL: https://www.sciencedirect.com/science/article/pii/S0378512217305431
+   eprint: https://www.sciencedirect.com/science/article/pii/S0378512217305431/pdf
  - Author: >
      G H de Bock and K M Vermeulen and L Jansen and J C Oosterwijk and
      S Siesling and M D Dorrius and T Feenstra and N Houssami and M J W Greuter
@@ -30,3 +90,19 @@ Reference:
    PMID: 22828861
    URL: https://bjssjournals.onlinelibrary.wiley.com/doi/abs/10.1002/bjs.8850
    eprint: https://bjssjournals.onlinelibrary.wiley.com/doi/epdf/10.1002/bjs.8850
+ - Author: >
+     Greuter MJ and Jansen-van der Weide MC and Jacobi CE and Oosterwijk JC
+    and Jansen L and Oudkerk M and de Bock GH 
+   Title: >
+     The validation of a simulation model incorporating radiation risk for
+    mammography breast cancer screening in women with a hereditary-increased
+    breast cancer risk 
+   Journal: European Journal of Cancer
+   Year: 2010
+   Volume: 46
+   Number: 3
+   Pages: 495-504
+   DOI: 10.1016/j.ejca.2009.10.030
+   PMID: 19945279 
+   URL: https://www.ejcancer.com/article/S0959-8049(09)00817-X/fulltext
+   eprint: https://www.ejcancer.com/action/showPdf?pii=S0959-8049%2809%2900817-X



View it on GitLab: https://salsa.debian.org/med-team/simrisc/-/commit/18cc6a779d209f8f7863f421a9daba336abfd0ba

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