Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
6f264ba1 by Andreas Tille at 2020-09-02T13:45:45+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,50 +1,50 @@
-Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
+Last-Update: Wed, 02 Sep 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 165 | {imaging,covid-19} |
- orthanc | 93 | {practice,covid-19,imaging} |
- orthanc-wsi | 48 | {his,laboratory,covid-19,imaging,practice,oncology} |
+ dcmtk | 160 | {imaging,covid-19} |
+ orthanc | 90 | {practice,covid-19,imaging} |
+ orthanc-wsi | 47 | {his,laboratory,covid-19,imaging,practice,oncology} |
gdcm | 34 | {imaging-dev} |
- dicomscope | 24 | {imaging} |
- dicom3tools | 23 | {imaging} |
+ dicom3tools | 24 | {imaging} |
+ dicomscope | 23 | {imaging} |
htsjdk | 21 | {bio-dev} |
gnumed-server | 20 | {covid-19,practice} |
- gdcm | 14 | {covid-19,imaging} |
- gdcm | 12 | {imaging-dev} |
+ gdcm | 15 | {covid-19,imaging} |
+ dcm2niix | 11 | {imaging} |
+ gdcm | 11 | {imaging-dev} |
invesalius | 11 | {imaging} |
+ minc-tools | 11 | {imaging} |
ngs-sdk | 11 | {bio-dev} |
- dcm2niix | 10 | {imaging} |
- minc-tools | 10 | {imaging} |
- openslide | 10 | {imaging} |
- adun.app | 9 | {bio} |
+ ngs-sdk | 10 | {bio-dev} |
insighttoolkit4 | 9 | {imaging-dev} |
- ngs-sdk | 9 | {bio-dev} |
nifticlib | 9 | {imaging} |
+ openslide | 9 | {imaging} |
+ plastimatch | 9 | {imaging} |
+ adun.app | 8 | {bio} |
fastlink | 8 | {bio,cloud} |
nifticlib | 8 | {imaging-dev} |
- plastimatch | 8 | {imaging} |
+ pixelmed | 8 | {imaging} |
treeview | 8 | {bio,bio-phylogeny} |
+ dicompyler | 7 | {oncology} |
librg-utils-perl | 7 | {bio} |
melting | 7 | {cloud,bio} |
+ obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
- pixelmed | 7 | {imaging} |
biosig4c++ | 6 | {physics,imaging} |
- dicompyler | 6 | {oncology} |
ea-utils | 6 | {bio} |
king | 6 | {typesetting,imaging} |
libdivsufsort | 6 | {bio-dev} |
+ libncl | 6 | {bio} |
multiqc | 6 | {bio,covid-19} |
- obitools | 6 | {bio} |
pymia | 6 | {imaging-dev} |
+ vtk-dicom | 6 | {imaging} |
bart-view | 5 | {imaging} |
biojava-live | 5 | {bio-dev} |
ecopcr | 5 | {bio} |
edtsurf | 5 | {bio} |
ipig | 5 | {bio} |
jebl2 | 5 | {bio-dev} |
- libminc | 5 | {imaging-dev} |
- libncl | 5 | {bio} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
phyutility | 5 | {bio,cloud} |
@@ -56,12 +56,12 @@ Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
salmon | 5 | {covid-19,bio} |
sibsim4 | 5 | {bio,cloud} |
spread-phy | 5 | {bio-phylogeny,bio} |
- vtk-dicom | 5 | {imaging} |
anfo | 4 | {cloud,bio} |
busco | 4 | {bio,covid-19} |
embassy-domainatrix | 4 | {cloud,bio} |
embassy-domalign | 4 | {cloud,bio} |
embassy-domsearch | 4 | {cloud,bio} |
+ libminc | 4 | {imaging-dev} |
mauve-aligner | 4 | {bio} |
mipe | 4 | {cloud,bio} |
mrs | 4 | {bio} |
@@ -70,6 +70,7 @@ Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
orthanc-postgresql | 4 | {imaging} |
paraclu | 4 | {bio,cloud} |
perm | 4 | {cloud,bio} |
+ phast | 4 | {bio} |
proalign | 4 | {bio,bio-phylogeny} |
radiant | 4 | {bio} |
stacks | 4 | {bio} |
@@ -85,11 +86,11 @@ Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
fsm-lite | 3 | {bio} |
jmodeltest | 3 | {bio-phylogeny,bio} |
libpal-java | 3 | {bio-dev} |
+ libsbml | 3 | {bio-dev} |
metaphlan2 | 3 | {bio} |
microbegps | 3 | {bio} |
nutsqlite | 3 | {tools} |
oscar | 3 | {data,practice,tools} |
- phast | 3 | {bio} |
phybin | 3 | {bio} |
placnet | 3 | {bio} |
prime-phylo | 3 | {cloud,bio} |
@@ -113,13 +114,13 @@ Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
clonalorigin | 2 | {bio} |
cufflinks | 2 | {bio,cloud} |
gatb-core | 2 | {bio} |
+ gatb-core | 2 | {bio-dev} |
getdata | 2 | {bio} |
hinge | 2 | {bio} |
jellyfish1 | 2 | {bio} |
lagan | 2 | {bio} |
lamarc | 2 | {bio} |
libctapimkt | 2 | {practice} |
- libsbml | 2 | {bio-dev} |
logol | 2 | {bio} |
mhap | 2 | {bio-ngs,bio} |
murasaki | 2 | {bio} |
@@ -146,7 +147,6 @@ Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
embassy-phylip | 1 | {cloud,bio} |
emboss-explorer | 1 | {bio} |
estscan | 1 | {bio} |
- gatb-core | 1 | {bio-dev} |
ghmm | 1 | {bio} |
intake | 1 | {bio-dev,bio} |
libvistaio | 1 | {imaging-dev} |
@@ -226,8 +226,8 @@ Last-Update: Wed, 02 Sep 2020 01:42:03 +0000
pilercr | 0 | {bio} |
plasmidseeker | 0 | {bio} |
pplacer | 0 | {covid-19,bio,bio-phylogeny} |
- relion | 0 | {bio} |
relion | 0 | {bio-dev} |
+ relion | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
scrappie | 0 | {covid-19,bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/6f264ba1248250ed24c8473d4343ed0c148fcf0f
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/6f264ba1248250ed24c8473d4343ed0c148fcf0f
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