[med-svn] [Git][med-team/python-biopython][master] 9 commits: exclude file .gitattributes

[Étienne Mollier]

Étienne Mollier pushed to branch master at Debian Med / python-biopython


Commits:
610b394c by Étienne Mollier at 2020-09-09T22:50:12+02:00
exclude file .gitattributes

The newly added "* text=auto" field will alter the upstream branch by
removing carriage returns in several text files.

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66c73b7f by Étienne Mollier at 2020-09-09T22:53:13+02:00
routine-update: New upstream version

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fda98908 by Étienne Mollier at 2020-09-09T22:53:15+02:00
New upstream version 1.78+dfsg
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d98eaec4 by Étienne Mollier at 2020-09-09T22:53:33+02:00
Update upstream source from tag 'upstream/1.78+dfsg'

Update to upstream version '1.78+dfsg'
with Debian dir 6924148e272a6a79a866230da47bcdc72b5380a0
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4165d113 by Étienne Mollier at 2020-09-09T22:53:33+02:00
routine-update: debhelper-compat 13

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c0dad5a4 by Étienne Mollier at 2020-09-09T22:58:26+02:00
removed patches applied upstream

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3d9a06ec by Étienne Mollier at 2020-09-09T23:09:56+02:00
add patch to fix a use of unversionned python

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24d9ec06 by Étienne Mollier at 2020-09-09T23:14:17+02:00
d/not-installed: indicate unused artifacts

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97ca22f0 by Étienne Mollier at 2020-09-10T00:33:01+02:00
add patch to stabilize phyml test

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30 changed files:

- .appveyor.yml
- .flake8
- − .gitattributes
- .github/PULL_REQUEST_TEMPLATE.md
- .gitignore
- + .pre-commit-config.yaml
- .travis-tox.ini
- .travis.yml
- Bio/Align/AlignInfo.py
- Bio/Align/Applications/_Muscle.py
- Bio/Align/__init__.py
- Bio/Align/_aligners.c
- Bio/Align/substitution_matrices/__init__.py
- + Bio/Align/substitution_matrices/data/HOXD70
- + Bio/Align/substitution_matrices/data/TRANS
- Bio/AlignIO/ClustalIO.py
- Bio/AlignIO/EmbossIO.py
- Bio/AlignIO/FastaIO.py
- Bio/AlignIO/Interfaces.py
- Bio/AlignIO/MafIO.py
- Bio/AlignIO/MauveIO.py
- Bio/AlignIO/MsfIO.py
- Bio/AlignIO/NexusIO.py
- Bio/AlignIO/PhylipIO.py
- Bio/AlignIO/StockholmIO.py
- Bio/AlignIO/__init__.py
- − Bio/Alphabet/IUPAC.py
- − Bio/Alphabet/Reduced.py
- Bio/Alphabet/__init__.py
- Bio/Application/__init__.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/9c4c52a4df0dd86c77057eeea5f9b50414552f68...97ca22f095eadd939d3a38ba1f8e343ea0b34252

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/9c4c52a4df0dd86c77057eeea5f9b50414552f68...97ca22f095eadd939d3a38ba1f8e343ea0b34252
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