Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d36334a6 by Andreas Tille at 2020-09-12T13:45:45+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,61 +1,62 @@
-Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
+Last-Update: Sat, 12 Sep 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 168 | {imaging,covid-19} |
- orthanc | 96 | {practice,covid-19,imaging} |
- orthanc-wsi | 50 | {his,laboratory,covid-19,imaging,practice,oncology} |
- gdcm | 37 | {imaging-dev} |
- htsjdk | 27 | {bio-dev} |
+ dcmtk | 170 | {imaging,covid-19} |
+ orthanc | 97 | {practice,covid-19,imaging} |
+ orthanc-wsi | 51 | {his,laboratory,covid-19,imaging,practice,oncology} |
+ gdcm | 38 | {imaging-dev} |
+ htsjdk | 28 | {bio-dev} |
dicom3tools | 23 | {imaging} |
- dicomscope | 21 | {imaging} |
+ dicomscope | 20 | {imaging} |
gnumed-server | 18 | {covid-19,practice} |
- gdcm | 14 | {covid-19,imaging} |
- adun.app | 12 | {bio} |
- invesalius | 12 | {imaging} |
- minc-tools | 11 | {imaging} |
+ adun.app | 13 | {bio} |
+ gdcm | 13 | {covid-19,imaging} |
+ invesalius | 11 | {imaging} |
ngs-sdk | 11 | {bio-dev} |
dcm2niix | 10 | {imaging} |
- dicompyler | 10 | {oncology} |
gdcm | 10 | {imaging-dev} |
+ minc-tools | 10 | {imaging} |
+ nifticlib | 10 | {imaging-dev} |
openslide | 10 | {imaging} |
+ dicompyler | 9 | {oncology} |
fastlink | 9 | {bio,cloud} |
+ insighttoolkit4 | 9 | {imaging-dev} |
melting | 9 | {cloud,bio} |
- nifticlib | 9 | {imaging-dev} |
pixelmed | 9 | {imaging} |
ea-utils | 8 | {bio} |
- insighttoolkit4 | 8 | {imaging-dev} |
multiqc | 8 | {bio,covid-19} |
- ngs-sdk | 8 | {bio-dev} |
treeview | 8 | {bio,bio-phylogeny} |
+ king | 7 | {typesetting,imaging} |
libncl | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
- nifticlib | 7 | {imaging} |
+ ngs-sdk | 7 | {bio-dev} |
obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
plastimatch | 7 | {imaging} |
staden | 7 | {bio} |
biojava-live | 6 | {bio-dev} |
+ biosig4c++ | 6 | {physics,imaging} |
edtsurf | 6 | {bio} |
ipig | 6 | {bio} |
jebl2 | 6 | {bio-dev} |
- king | 6 | {typesetting,imaging} |
- pymia | 6 | {imaging-dev} |
+ nifticlib | 6 | {imaging} |
salmon | 6 | {covid-19,bio} |
anfo | 5 | {cloud,bio} |
+ arden | 5 | {cloud,bio} |
bart-view | 5 | {imaging} |
- biosig4c++ | 5 | {physics,imaging} |
busco | 5 | {bio,covid-19} |
ecopcr | 5 | {bio} |
embassy-domalign | 5 | {cloud,bio} |
embassy-domsearch | 5 | {cloud,bio} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
mauve-aligner | 5 | {bio} |
+ microbegps | 5 | {bio} |
mipe | 5 | {cloud,bio} |
neobio | 5 | {cloud,bio} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
phyutility | 5 | {bio,cloud} |
- piler | 5 | {bio} |
+ pymia | 5 | {imaging-dev} |
radiant | 5 | {bio} |
rdp-alignment | 5 | {bio} |
rdp-classifier | 5 | {bio} |
@@ -65,23 +66,25 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
stacks | 5 | {bio} |
zalign | 5 | {cloud,bio} |
alter-sequence-alignment | 4 | {bio} |
- arden | 4 | {cloud,bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
embassy-domainatrix | 4 | {cloud,bio} |
fastml | 4 | {bio} |
fsm-lite | 4 | {bio} |
+ gatb-core | 4 | {bio} |
+ jellyfish1 | 4 | {bio} |
jmodeltest | 4 | {bio-phylogeny,bio} |
libdivsufsort | 4 | {bio-dev} |
libminc | 4 | {imaging-dev} |
libpal-java | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
- microbegps | 4 | {bio} |
+ nutsqlite | 4 | {tools} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
oscar | 4 | {data,practice,tools} |
paraclu | 4 | {bio,cloud} |
perm | 4 | {cloud,bio} |
phast | 4 | {bio} |
+ piler | 4 | {bio} |
predictprotein | 4 | {bio} |
prime-phylo | 4 | {cloud,bio} |
proalign | 4 | {bio,bio-phylogeny} |
@@ -91,18 +94,13 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
bio-tradis | 3 | {bio,bio-dev} |
bitseq | 3 | {bio} |
blasr | 3 | {bio-ngs,bio} |
- brig | 3 | {bio} |
clonalorigin | 3 | {bio} |
dindel | 3 | {bio} |
elastix | 3 | {imaging} |
- gatb-core | 3 | {bio} |
- jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
libsbml | 3 | {bio-dev} |
- logol | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
murasaki | 3 | {bio} |
- nutsqlite | 3 | {tools} |
phybin | 3 | {bio} |
placnet | 3 | {bio} |
prottest | 3 | {bio,bio-phylogeny} |
@@ -119,9 +117,9 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
beast2-mcmc | 2 | {bio} |
biomaj3-cli | 2 | {cloud} |
biomaj3-daemon | 2 | {bio} |
+ brig | 2 | {bio} |
canu | 2 | {bio} |
clonalframeml | 2 | {bio,covid-19} |
- cufflinks | 2 | {bio,cloud} |
estscan | 2 | {bio} |
gatb-core | 2 | {bio-dev} |
getdata | 2 | {bio} |
@@ -129,6 +127,7 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
hinge | 2 | {bio} |
lagan | 2 | {bio} |
libctapimkt | 2 | {practice} |
+ logol | 2 | {bio} |
mrs | 2 | {bio} |
patman | 2 | {bio} |
pbdagcon | 2 | {bio} |
@@ -143,13 +142,14 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
soapsnp | 2 | {bio} |
velvetoptimiser | 2 | {bio} |
yaha | 2 | {bio} |
- acedb | 1 | {cloud,bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
blimps | 1 | {bio} |
cat-bat | 1 | {covid-19,bio} |
+ cufflinks | 1 | {bio,cloud} |
delly | 1 | {covid-19,bio} |
dextractor | 1 | {bio,covid-19} |
embassy-phylip | 1 | {cloud,bio} |
+ emboss-explorer | 1 | {bio} |
intake | 1 | {bio-dev,bio} |
libvistaio | 1 | {imaging-dev} |
ngs-sdk | 1 | {bio-dev} |
@@ -162,6 +162,7 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
sight | 1 | {imaging} |
tvc | 1 | {bio} |
vienna-rna | 1 | {covid-19,bio} |
+ acedb | 0 | {cloud,bio} |
atropos | 0 | {bio} |
bambamc | 0 | {bio-dev} |
bamkit | 0 | {covid-19,bio} |
@@ -173,7 +174,6 @@ Last-Update: Sat, 12 Sep 2020 01:42:03 +0000
camp | 0 | {imaging-dev} |
conda-package-handling | 0 | {bio-dev,bio} |
ctn | 0 | {imaging-dev} |
- emboss-explorer | 0 | {bio} |
emmax | 0 | {bio} |
fis-gtm | 0 | {his} |
htscodecs | 0 | {covid-19,bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d36334a629c7ff259f6735e39d68d494bdeb86b5
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d36334a629c7ff259f6735e39d68d494bdeb86b5
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