Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
c4fcecca by Andreas Tille at 2020-09-13T13:45:15+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,54 +1,55 @@
-Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
+Last-Update: Sun, 13 Sep 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 170 | {imaging,covid-19} |
- orthanc | 97 | {practice,covid-19,imaging} |
+ dcmtk | 174 | {imaging,covid-19} |
+ orthanc | 98 | {practice,covid-19,imaging} |
orthanc-wsi | 51 | {his,laboratory,covid-19,imaging,practice,oncology} |
- gdcm | 38 | {imaging-dev} |
- htsjdk | 28 | {bio-dev} |
- dicom3tools | 23 | {imaging} |
- dicomscope | 20 | {imaging} |
- gnumed-server | 18 | {covid-19,practice} |
+ gdcm | 39 | {imaging-dev} |
+ htsjdk | 27 | {bio-dev} |
+ dicom3tools | 24 | {imaging} |
+ dicomscope | 21 | {imaging} |
+ gnumed-server | 19 | {covid-19,practice} |
adun.app | 13 | {bio} |
gdcm | 13 | {covid-19,imaging} |
- invesalius | 11 | {imaging} |
+ invesalius | 12 | {imaging} |
+ gdcm | 11 | {imaging-dev} |
ngs-sdk | 11 | {bio-dev} |
+ nifticlib | 11 | {imaging-dev} |
dcm2niix | 10 | {imaging} |
- gdcm | 10 | {imaging-dev} |
+ insighttoolkit4 | 10 | {imaging-dev} |
minc-tools | 10 | {imaging} |
- nifticlib | 10 | {imaging-dev} |
openslide | 10 | {imaging} |
dicompyler | 9 | {oncology} |
fastlink | 9 | {bio,cloud} |
- insighttoolkit4 | 9 | {imaging-dev} |
melting | 9 | {cloud,bio} |
pixelmed | 9 | {imaging} |
ea-utils | 8 | {bio} |
+ king | 8 | {typesetting,imaging} |
multiqc | 8 | {bio,covid-19} |
+ plastimatch | 8 | {imaging} |
treeview | 8 | {bio,bio-phylogeny} |
- king | 7 | {typesetting,imaging} |
libncl | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
ngs-sdk | 7 | {bio-dev} |
+ nifticlib | 7 | {imaging} |
obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
- plastimatch | 7 | {imaging} |
staden | 7 | {bio} |
+ arden | 6 | {cloud,bio} |
biojava-live | 6 | {bio-dev} |
biosig4c++ | 6 | {physics,imaging} |
edtsurf | 6 | {bio} |
ipig | 6 | {bio} |
jebl2 | 6 | {bio-dev} |
- nifticlib | 6 | {imaging} |
salmon | 6 | {covid-19,bio} |
anfo | 5 | {cloud,bio} |
- arden | 5 | {cloud,bio} |
bart-view | 5 | {imaging} |
busco | 5 | {bio,covid-19} |
ecopcr | 5 | {bio} |
embassy-domalign | 5 | {cloud,bio} |
embassy-domsearch | 5 | {cloud,bio} |
+ libdivsufsort | 5 | {bio-dev} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
mauve-aligner | 5 | {bio} |
microbegps | 5 | {bio} |
@@ -67,16 +68,17 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
zalign | 5 | {cloud,bio} |
alter-sequence-alignment | 4 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
+ elastix | 4 | {imaging} |
embassy-domainatrix | 4 | {cloud,bio} |
fastml | 4 | {bio} |
fsm-lite | 4 | {bio} |
gatb-core | 4 | {bio} |
jellyfish1 | 4 | {bio} |
jmodeltest | 4 | {bio-phylogeny,bio} |
- libdivsufsort | 4 | {bio-dev} |
libminc | 4 | {imaging-dev} |
libpal-java | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
+ mhap | 4 | {bio-ngs,bio} |
nutsqlite | 4 | {tools} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
@@ -94,18 +96,20 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
bio-tradis | 3 | {bio,bio-dev} |
bitseq | 3 | {bio} |
blasr | 3 | {bio-ngs,bio} |
+ brig | 3 | {bio} |
clonalorigin | 3 | {bio} |
dindel | 3 | {bio} |
- elastix | 3 | {imaging} |
lamarc | 3 | {bio} |
libsbml | 3 | {bio-dev} |
- mhap | 3 | {bio-ngs,bio} |
+ logol | 3 | {bio} |
+ mrs | 3 | {bio} |
murasaki | 3 | {bio} |
phybin | 3 | {bio} |
placnet | 3 | {bio} |
prottest | 3 | {bio,bio-phylogeny} |
pscan-chip | 3 | {bio} |
quorum | 3 | {bio} |
+ rambo-k | 3 | {bio} |
relion | 3 | {bio} |
rtax | 3 | {cloud,bio} |
scrm | 3 | {bio} |
@@ -117,7 +121,6 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
beast2-mcmc | 2 | {bio} |
biomaj3-cli | 2 | {cloud} |
biomaj3-daemon | 2 | {bio} |
- brig | 2 | {bio} |
canu | 2 | {bio} |
clonalframeml | 2 | {bio,covid-19} |
estscan | 2 | {bio} |
@@ -127,12 +130,9 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
hinge | 2 | {bio} |
lagan | 2 | {bio} |
libctapimkt | 2 | {practice} |
- logol | 2 | {bio} |
- mrs | 2 | {bio} |
patman | 2 | {bio} |
pbdagcon | 2 | {bio} |
qcumber | 2 | {bio} |
- rambo-k | 2 | {bio} |
relion | 2 | {bio} |
runcircos-gui | 2 | {bio} |
samtools-legacy | 2 | {bio-dev} |
@@ -143,7 +143,6 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
velvetoptimiser | 2 | {bio} |
yaha | 2 | {bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
- blimps | 1 | {bio} |
cat-bat | 1 | {covid-19,bio} |
cufflinks | 1 | {bio,cloud} |
delly | 1 | {covid-19,bio} |
@@ -155,10 +154,10 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
ngs-sdk | 1 | {bio-dev} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
+ plasmidseeker | 1 | {bio} |
q2templates | 1 | {bio} |
samblaster | 1 | {covid-19,bio} |
seqan | 1 | {bio-dev} |
- sift | 1 | {bio} |
sight | 1 | {imaging} |
tvc | 1 | {bio} |
vienna-rna | 1 | {covid-19,bio} |
@@ -170,6 +169,7 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
biojava4-live | 0 | {bio-dev} |
biosig4c++ | 0 | {physics} |
biosyntax | 0 | {bio} |
+ blimps | 0 | {bio} |
bustools | 0 | {bio,covid-19} |
camp | 0 | {imaging-dev} |
conda-package-handling | 0 | {bio-dev,bio} |
@@ -223,7 +223,6 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
pilercr | 0 | {bio} |
- plasmidseeker | 0 | {bio} |
pplacer | 0 | {covid-19,bio,bio-phylogeny} |
relion | 0 | {bio-dev} |
relion | 0 | {bio} |
@@ -231,6 +230,7 @@ Last-Update: Sun, 13 Sep 2020 01:42:04 +0000
sbmltoolbox | 0 | {bio-dev} |
scrappie | 0 | {covid-19,bio} |
seq-gen | 0 | {bio} |
+ sift | 0 | {bio} |
simpleitk | 0 | {imaging-dev} |
skesa | 0 | {bio} |
skewer | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c4fcecca696edd355cc4d26529161cc0d8ae36d8
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c4fcecca696edd355cc4d26529161cc0d8ae36d8
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