[med-svn] [Git][med-team/edtsurf][master] 6 commits: Create changelog entry that makes sense for the reader of the latest released version of edtsurf

Tue Sep 15 16:59:05 BST 2020


Andreas Tille pushed to branch master at Debian Med / edtsurf


Commits:
f019e30a by Andreas Tille at 2020-09-15T16:53:15+02:00
Create changelog entry that makes sense for the reader of the latest released version of edtsurf

- - - - -
149deae2 by Andreas Tille at 2020-09-15T16:54:52+02:00
There is no good reason any more to provide an extra package for the small remaining dataset

- - - - -
d8a29bb3 by Andreas Tille at 2020-09-15T16:55:50+02:00
Remove comments from boilerplate

- - - - -
39641575 by Andreas Tille at 2020-09-15T17:10:45+02:00
Drop now removed reference files

- - - - -
6cb7caa7 by Andreas Tille at 2020-09-15T17:12:26+02:00
The Copyright field is mandatory

- - - - -
8b7591e1 by Andreas Tille at 2020-09-15T17:58:34+02:00
Upload to unstable

- - - - -


7 changed files:

- debian/changelog
- debian/control
- debian/copyright
- − debian/edtsurf-examples.install
- + debian/edtsurf.examples
- debian/source/include-binaries
- debian/tests/run-unit-test


Changes:

=====================================
debian/changelog
=====================================
@@ -1,34 +1,14 @@
-edtsurf (0.2009-8ubuntu1) unstable; urgency=medium
-
-  * Remove autopkgtest reference files
-  * Use checksums for autopkgtest verification
-  * Improve autopkgtests
-  * Update docs
-  * Update changelog
-  * routine-update: Ready to upload to unstable
-  * Add copyright information for autopkgtest data
-  * Remove trailing whitespace in debian/copyright (routine-update)
-  * Set upstream metadata fields: Contact, Name.
-
- -- Pranav Ballaney <ballaneypranav at gmail.com>  Tue, 15 Sep 2020 18:38:24 +0530
-
-edtsurf (0.2009-8) unstable; urgency=medium
-
-  * do not hard code the build architecture compiler in upstream Makefile
-    (Thanks for the patch to Helmut Grohne)
-    Closes: #969630
-
- -- Andreas Tille <tille at debian.org>  Thu, 10 Sep 2020 10:35:39 +0200
-
 edtsurf (0.2009-7) unstable; urgency=medium
 
   [ Pranav Ballaney ]
-  * Add test data and references
-  * Make a new binary package for examples
+  * Add test data and checksums for autopkgtest verification
   * Patch to fix return values
   * Add autopkgtests
   * Install docs
   * Add Pranav Ballaney to Uploaders
+  * Add copyright information for autopkgtest data
+  * Remove trailing whitespace in debian/copyright (routine-update)
+  * Set upstream metadata fields: Contact, Name.
 
   [ Andreas Tille ]
   * Standards-Version: 4.5.0 (routine-update)
@@ -40,8 +20,11 @@ edtsurf (0.2009-7) unstable; urgency=medium
   * Set field Upstream-Contact in debian/copyright.
   * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
     present in machine-readable debian/copyright).
+  * do not hard code the build architecture compiler in upstream Makefile
+    (Thanks for the patch to Helmut Grohne)
+    Closes: #969630
 
- -- Pranav Ballaney <ballaneypranav at gmail.com>  Mon, 06 Jul 2020 12:52:53 +0530
+ -- Pranav Ballaney <ballaneypranav at gmail.com>  Tue, 15 Sep 2020 18:38:24 +0530
 
 edtsurf (0.2009-6) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -16,23 +16,10 @@ Package: edtsurf
 Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
-Suggests: meshlab, edtsurf-examples
+Suggests: meshlab
 Description: triangulated mesh surfaces for protein structures
  EDTSurf is a open source program to construct triangulated surfaces
  for macromolecules. It generates three major macromolecular surfaces:
  van der Waals surface, solvent-accessible surface and molecular surface
  (solvent-excluded surface). EDTsurf also identifies cavities which are
  inside of macromolecules.
-
-Package: edtsurf-examples
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Enhances: edtsurf
-Description: triangulated mesh surfaces for protein structures
- EDTSurf is a open source program to construct triangulated surfaces
- for macromolecules. It generates three major macromolecular surfaces:
- van der Waals surface, solvent-accessible surface and molecular surface
- (solvent-excluded surface). EDTsurf also identifies cavities which are
- inside of macromolecules.
- This package contains some examples for EDTSurf.


=====================================
debian/copyright
=====================================
@@ -31,6 +31,7 @@ License: GPL-2+
  Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
 
 Files: debian/tests/data/*
+Copyright: not claimed
 Source: https://www.rcsb.org/structure/4WE2
 License: public-domain
  Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all
@@ -38,4 +39,3 @@ License: public-domain
  and commercial use. Users of the data should attribute the original authors of that
  structural data. By using the materials available in the PDB archive, the user
  agrees to abide by the conditions described in the wwPDB Privacy and Usage Policy.
-


=====================================
debian/edtsurf-examples.install deleted
=====================================
@@ -1 +0,0 @@
-debian/tests/data /usr/share/doc/edtsurf/examples/
\ No newline at end of file


=====================================
debian/edtsurf.examples
=====================================
@@ -0,0 +1 @@
+debian/tests/data


=====================================
debian/source/include-binaries
=====================================
@@ -1,3 +1 @@
-debian/tests/ref/4we2.ply.gz
-debian/tests/ref/4we2-cav.pdb.gz
 debian/tests/data/4we2.pdb.gz


=====================================
debian/tests/run-unit-test
=====================================
@@ -6,9 +6,6 @@ pkg=edtsurf
 export LC_ALL=C.UTF-8
 if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
   AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
-  # Double quote below to expand the temporary directory variable now versus
-  # later is on purpose.
-  # shellcheck disable=SC2064
   trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
 fi
 
@@ -18,7 +15,6 @@ cd "${AUTOPKGTEST_TMP}"
 
 gunzip -r *
 ls -R
-#do_stuff_to_test_package#
 
 cd data
 
@@ -62,4 +58,3 @@ md5sum --check checksums
 
 echo -e "\e[92m\e[1mPassed\e[0m"
 echo
-



View it on GitLab: https://salsa.debian.org/med-team/edtsurf/-/compare/bad5caa3c9d4e0464946db7ea170c629f04dbc52...8b7591e1a1d4d00cf5614d4d6cab40768c357e22

-- 
View it on GitLab: https://salsa.debian.org/med-team/edtsurf/-/compare/bad5caa3c9d4e0464946db7ea170c629f04dbc52...8b7591e1a1d4d00cf5614d4d6cab40768c357e22
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