[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Sat Sep 19 14:45:42 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
ad4966d6 by Andreas Tille at 2020-09-19T13:45:38+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,50 +1,50 @@
-Last-Update: Sat, 19 Sep 2020 01:42:04 +0000
+Last-Update: Sat, 19 Sep 2020 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    165 | {imaging,covid-19}                                  | 
+ dcmtk                         |    164 | {imaging,covid-19}                                  | 
  orthanc                       |     95 | {practice,covid-19,imaging}                         | 
  orthanc-wsi                   |     50 | {his,laboratory,covid-19,imaging,practice,oncology} | 
  gdcm                          |     41 | {imaging-dev}                                       | 
- htsjdk                        |     28 | {bio-dev}                                           | 
- dicom3tools                   |     23 | {imaging}                                           | 
- dicomscope                    |     22 | {imaging}                                           | 
+ htsjdk                        |     29 | {bio-dev}                                           | 
+ dicom3tools                   |     24 | {imaging}                                           | 
+ dicomscope                    |     23 | {imaging}                                           | 
  gnumed-server                 |     18 | {covid-19,practice}                                 | 
+ gdcm                          |     14 | {covid-19,imaging}                                  | 
  adun.app                      |     13 | {bio}                                               | 
- gdcm                          |     13 | {imaging-dev}                                       | 
- gdcm                          |     13 | {covid-19,imaging}                                  | 
- invesalius                    |     13 | {imaging}                                           | 
+ dcm2niix                      |     12 | {imaging}                                           | 
+ gdcm                          |     12 | {imaging-dev}                                       | 
+ invesalius                    |     12 | {imaging}                                           | 
  ngs-sdk                       |     12 | {bio-dev}                                           | 
- pixelmed                      |     11 | {imaging}                                           | 
- dcm2niix                      |     10 | {imaging}                                           | 
- minc-tools                    |     10 | {imaging}                                           | 
- openslide                     |     10 | {imaging}                                           | 
+ pixelmed                      |     12 | {imaging}                                           | 
+ minc-tools                    |     11 | {imaging}                                           | 
+ openslide                     |     11 | {imaging}                                           | 
  dicompyler                    |      9 | {oncology}                                          | 
  melting                       |      9 | {cloud,bio}                                         | 
  nifticlib                     |      9 | {imaging-dev}                                       | 
  nifticlib                     |      9 | {imaging}                                           | 
  ea-utils                      |      8 | {bio}                                               | 
- insighttoolkit4               |      8 | {imaging-dev}                                       | 
+ king                          |      8 | {typesetting,imaging}                               | 
  multiqc                       |      8 | {bio,covid-19}                                      | 
- ngs-sdk                       |      8 | {bio-dev}                                           | 
  orthanc-webviewer             |      8 | {imaging}                                           | 
  plastimatch                   |      8 | {imaging}                                           | 
- treeview                      |      8 | {bio,bio-phylogeny}                                 | 
- king                          |      7 | {typesetting,imaging}                               | 
+ biosig4c++                    |      7 | {physics,imaging}                                   | 
+ insighttoolkit4               |      7 | {imaging-dev}                                       | 
  libncl                        |      7 | {bio}                                               | 
  librg-utils-perl              |      7 | {bio}                                               | 
+ ngs-sdk                       |      7 | {bio-dev}                                           | 
  staden                        |      7 | {bio}                                               | 
+ treeview                      |      7 | {bio,bio-phylogeny}                                 | 
  biojava-live                  |      6 | {bio-dev}                                           | 
- biosig4c++                    |      6 | {physics,imaging}                                   | 
  fastlink                      |      6 | {bio,cloud}                                         | 
  jebl2                         |      6 | {bio-dev}                                           | 
  libdivsufsort                 |      6 | {bio-dev}                                           | 
  obitools                      |      6 | {bio}                                               | 
  salmon                        |      6 | {covid-19,bio}                                      | 
+ vtk-dicom                     |      6 | {imaging}                                           | 
  anfo                          |      5 | {cloud,bio}                                         | 
  arden                         |      5 | {cloud,bio}                                         | 
  bart-view                     |      5 | {imaging}                                           | 
- busco                         |      5 | {bio,covid-19}                                      | 
  embassy-domalign              |      5 | {cloud,bio}                                         | 
  embassy-domsearch             |      5 | {cloud,bio}                                         | 
  ipig                          |      5 | {bio}                                               | 
@@ -59,11 +59,10 @@ Last-Update: Sat, 19 Sep 2020 01:42:04 +0000
  sibsim4                       |      5 | {bio,cloud}                                         | 
  spread-phy                    |      5 | {bio-phylogeny,bio}                                 | 
  stacks                        |      5 | {bio}                                               | 
- vtk-dicom                     |      5 | {imaging}                                           | 
  alter-sequence-alignment      |      4 | {bio}                                               | 
  beast-mcmc                    |      4 | {bio,bio-phylogeny}                                 | 
+ busco                         |      4 | {bio,covid-19}                                      | 
  ecopcr                        |      4 | {bio}                                               | 
- elastix                       |      4 | {imaging}                                           | 
  embassy-domainatrix           |      4 | {cloud,bio}                                         | 
  fastml                        |      4 | {bio}                                               | 
  fsm-lite                      |      4 | {bio}                                               | 
@@ -94,6 +93,7 @@ Last-Update: Sat, 19 Sep 2020 01:42:04 +0000
  brig                          |      3 | {bio}                                               | 
  clonalorigin                  |      3 | {bio}                                               | 
  dindel                        |      3 | {bio}                                               | 
+ elastix                       |      3 | {imaging}                                           | 
  lagan                         |      3 | {bio}                                               | 
  lamarc                        |      3 | {bio}                                               | 
  libminc                       |      3 | {imaging-dev}                                       | 
@@ -158,7 +158,6 @@ Last-Update: Sat, 19 Sep 2020 01:42:04 +0000
  pbcopper                      |      1 | {bio-dev}                                           | 
  plasmidseeker                 |      1 | {bio}                                               | 
  q2templates                   |      1 | {bio}                                               | 
- relion                        |      1 | {bio}                                               | 
  samblaster                    |      1 | {covid-19,bio}                                      | 
  seqan                         |      1 | {bio-dev}                                           | 
  sight                         |      1 | {imaging}                                           | 
@@ -225,8 +224,8 @@ Last-Update: Sat, 19 Sep 2020 01:42:04 +0000
  pilercr                       |      0 | {bio}                                               | 
  plasmidid                     |      0 | {bio,covid-19}                                      | 
  pplacer                       |      0 | {covid-19,bio,bio-phylogeny}                        | 
- relion                        |      0 | {bio}                                               | 
  relion                        |      0 | {bio-dev}                                           | 
+ relion                        |      0 | {bio}                                               | 
  sambamba                      |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  scrappie                      |      0 | {covid-19,bio}                                      | 
@@ -250,5 +249,5 @@ Last-Update: Sat, 19 Sep 2020 01:42:04 +0000
  orthanc-python                |     -1 | {covid-19}                                          | 
  shovill                       |     -1 | {bio,covid-19}                                      | 
  sight                         |     -1 | {imaging-dev}                                       | 
-(277 rows)
+(276 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ad4966d6d95db21440ed69585576d01f54fac55a

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ad4966d6d95db21440ed69585576d01f54fac55a
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