Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
fa8c9076 by Andreas Tille at 2021-04-07T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,29 +1,29 @@
-Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
+Last-Update: Wed, 07 Apr 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 203 | {covid-19,imaging} |
+ dcmtk | 205 | {covid-19,imaging} |
orthanc | 96 | {covid-19,imaging,practice} |
orthanc-wsi | 46 | {his,practice,covid-19,oncology,imaging,laboratory} |
- gdcm | 39 | {imaging-dev} |
+ gdcm | 41 | {imaging-dev} |
amide | 36 | {imaging} |
- openslide | 35 | {imaging} |
dicom3tools | 34 | {imaging} |
- dicomscope | 28 | {imaging} |
- dcm2niix | 25 | {imaging} |
+ openslide | 33 | {imaging} |
+ dicomscope | 27 | {imaging} |
+ dcm2niix | 24 | {imaging} |
gdcm | 22 | {covid-19,imaging} |
- odin | 22 | {imaging,imaging-dev} |
- htsjdk | 21 | {bio-dev} |
- minc-tools | 19 | {imaging} |
+ odin | 21 | {imaging,imaging-dev} |
+ htsjdk | 18 | {bio-dev} |
+ minc-tools | 18 | {imaging} |
nifticlib | 18 | {imaging} |
- pixelmed | 17 | {imaging} |
- dicomnifti | 16 | {imaging} |
+ dicomnifti | 17 | {imaging} |
gdcm | 16 | {imaging-dev} |
invesalius | 16 | {imaging} |
- mia | 16 | {imaging} |
+ pixelmed | 16 | {imaging} |
gnumed-server | 15 | {covid-19,practice} |
+ mia | 15 | {imaging} |
+ nipype | 15 | {imaging-dev,imaging} |
vtk-dicom | 15 | {imaging} |
- nipype | 12 | {imaging-dev,imaging} |
plastimatch | 12 | {imaging} |
adun.app | 11 | {bio} |
insighttoolkit4 | 11 | {imaging-dev} |
@@ -31,19 +31,18 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
nifti2dicom | 10 | {imaging} |
king | 9 | {typesetting,imaging} |
melting | 9 | {cloud,bio} |
- nifti2dicom | 9 | {imaging} |
- ngs-sdk | 8 | {bio-dev} |
- ngs-sdk | 7 | {bio-dev} |
+ ngs-sdk | 9 | {bio-dev} |
+ nifti2dicom | 8 | {imaging} |
treeview | 7 | {bio-phylogeny,bio} |
- bamkit | 6 | {bio,covid-19} |
- dicompyler | 6 | {oncology} |
jebl2 | 6 | {bio-dev} |
libminc | 6 | {imaging-dev} |
- librg-utils-perl | 6 | {bio} |
+ ngs-sdk | 6 | {bio-dev} |
+ bamkit | 5 | {bio,covid-19} |
biomaj3-cli | 5 | {cloud} |
- elastix | 5 | {imaging} |
+ dicompyler | 5 | {oncology} |
lagan | 5 | {bio} |
libncl | 5 | {bio} |
+ librg-utils-perl | 5 | {bio} |
obitools | 5 | {bio} |
openslide | 5 | {imaging-dev} |
salmid | 5 | {bio} |
@@ -55,6 +54,7 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
bio-tradis | 4 | {bio,bio-dev} |
bitseq | 4 | {bio} |
ea-utils | 4 | {bio} |
+ elastix | 4 | {imaging} |
estscan | 4 | {bio} |
lamarc | 4 | {bio} |
ngs-sdk | 4 | {bio-dev} |
@@ -114,13 +114,13 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
intake | 2 | {bio-dev,bio} |
ipig | 2 | {bio} |
jmodeltest | 2 | {bio,bio-phylogeny} |
+ libctapimkt | 2 | {practice} |
libpal-java | 2 | {bio-dev} |
librdp-taxonomy-tree-java | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
mhap | 2 | {bio-ngs,bio} |
microbegps | 2 | {bio} |
- oscar | 2 | {practice,data,tools} |
paraclu | 2 | {bio,cloud} |
perm | 2 | {cloud,bio} |
placnet | 2 | {bio} |
@@ -151,13 +151,13 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
fsm-lite | 1 | {bio} |
htscodecs | 1 | {covid-19,bio-dev} |
kmerresistance | 1 | {bio} |
- libctapimkt | 1 | {practice} |
libmuscle | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
metaphlan2 | 1 | {bio} |
nanosv | 1 | {covid-19,bio} |
opencfu | 1 | {laboratory} |
orthanc-gdcm | 1 | {imaging} |
+ oscar | 1 | {practice,data,tools} |
papyrus | 1 | {imaging-dev} |
pigx-rnaseq | 1 | {covid-19,bio} |
pilercr | 1 | {bio} |
@@ -174,7 +174,6 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
svim | 1 | {bio} |
thesias | 1 | {bio,covid-19} |
tophat-recondition | 1 | {covid-19,bio} |
- varna | 1 | {bio} |
yanagiba | 1 | {covid-19,bio} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
@@ -226,8 +225,8 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
python-epimodels | 0 | {epi} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
q2-sample-classifier | 0 | {bio,bio-dev} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
@@ -235,6 +234,7 @@ Last-Update: Wed, 07 Apr 2021 01:42:03 +0000
simrisc | 0 | {oncology} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
+ varna | 0 | {bio} |
vtk-dicom | 0 | {imaging-dev} |
xdffileio | 0 | {imaging-dev} |
mssstest | -1 | {tools} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fa8c90762144b1030c5907548ec9b4ab8583fee0
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fa8c90762144b1030c5907548ec9b4ab8583fee0
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