[med-svn] [Git][med-team/artemis][master] 2 commits: Removing useless dependency on jarwrapper

[Pierre Gruet]

Pierre Gruet pushed to branch master at Debian Med / artemis


Commits:
fbf905bd by Pierre Gruet at 2021-04-26T17:28:35+02:00
Removing useless dependency on jarwrapper

- - - - -
896db209 by Pierre Gruet at 2021-04-26T17:30:40+02:00
Using my debian.org email address

- - - - -


9 changed files:

- debian/changelog
- debian/control
- debian/copyright
- debian/patches/debianize_launcher_scripts.patch
- debian/patches/missing_htsjdk_dependency_in_pom.patch
- debian/patches/no_install_of_provided_jars.patch
- debian/patches/running_build_tests.patch
- debian/patches/using_system_jars_in_pom.patch
- debian/tests/run-some-unit-tests


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+artemis (18.1.0+dfsg-4) UNRELEASED; urgency=medium
+
+  * Removing useless dependency on jarwrapper
+
+ -- Pierre Gruet <pgt at debian.org>  Mon, 26 Apr 2021 17:27:18 +0200
+
 artemis (18.1.0+dfsg-3) unstable; urgency=medium
 
   * Changing homepage in d/control and manpages (Closes: #974680)


=====================================
debian/control
=====================================
@@ -1,7 +1,7 @@
 Source: artemis
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>,
-           Pierre Gruet <pgtdebian at free.fr>
+           Pierre Gruet <pgt at debian.org>
 Section: science
 Priority: optional
 Build-Depends: debhelper-compat (= 13),
@@ -59,8 +59,7 @@ Depends: ${misc:Depends},
          libpicard-java,
          jemboss,
          libcglib-java,
-         default-jre,
-         jarwrapper
+         default-jre
 Description: genome browser and annotation tool
  Artemis is a genome browser and annotation tool that allows visualisation of
  sequence features, next generation data and the results of analyses within the


=====================================
debian/copyright
=====================================
@@ -49,7 +49,7 @@ License: Apache-2.0
 
 Files: debian/*
 Copyright: 2015-2016 Afif Elghraoui <afif at debian.org>
-           2020 Pierre Gruet <pgtdebian at free.fr>
+           2020 Pierre Gruet <pgt at debian.org>
 License: GPL-2+
 
 License: Expat


=====================================
debian/patches/debianize_launcher_scripts.patch
=====================================
@@ -1,7 +1,7 @@
 Description: Simplifying the provided launchers
  Many options or tricks are useless on a Debian system.
  The paths are also adapted to the Debian install.
-Author: Pierre Gruet <pgtdebian at free.fr>
+Author: Pierre Gruet <pgt at debian.org>
 Forwarded: not-needed
 Last-Update: 2020-09-06
 


=====================================
debian/patches/missing_htsjdk_dependency_in_pom.patch
=====================================
@@ -1,5 +1,5 @@
 Description: adding missing dependency on htsjdk in pom
-Author: Pierre Gruet <pgtdebian at free.fr>
+Author: Pierre Gruet <pgt at debian.org>
 Forwarded: https://github.com/sanger-pathogens/Artemis/issues/313
 Last-Update: 2020-09-04
 


=====================================
debian/patches/no_install_of_provided_jars.patch
=====================================
@@ -1,7 +1,7 @@
 Description: avoid installing embedded jars as we removed them
  Author relies on jars that are embedded in their source archive. Instead, we
  use the ones that are packaged in Debian.
-Author: Pierre Gruet <pgtdebian at free.fr>
+Author: Pierre Gruet <pgt at debian.org>
 Forwarded: not-needed
 Last-Update: 2020-09-04
 


=====================================
debian/patches/running_build_tests.patch
=====================================
@@ -4,7 +4,7 @@ Description: changes in pom and in test definitions when they cannot be run
  We also remove the lines allowing to skip tests or to ignore failures.
  In the definitions of the tests, we add @Ignore for the ones that require a
  X11 instance to run.
-Author: Pierre Gruet <pgtdebian at free.fr>
+Author: Pierre Gruet <pgt at debian.org>
 Forwarded: not-needed
 Last-Update: 2020-09-05
 


=====================================
debian/patches/using_system_jars_in_pom.patch
=====================================
@@ -1,7 +1,7 @@
 Description: specifying paths on Debian system for some dependencies
  For those dependencies, no maven-repo tree is available, we are therefore
  giving their path with system scope.
-Author: Pierre Gruet <pgtdebian at free.fr>
+Author: Pierre Gruet <pgt at debian.org>
 Forwarded: not-needed
 Last-Update: 2020-09-04
 


=====================================
debian/tests/run-some-unit-tests
=====================================
@@ -4,7 +4,7 @@ set -e
 # autopkgtest check: run some unit tests. Some other tests try to launch X11
 # or connect through ssh, having the selected one run should be good enough.
 # (C) 2020 Pierre Gruet.
-# Author: Pierre Gruet <pgtdebian at free.fr>
+# Author: Pierre Gruet <pgt at debian.org>
 
 
 pkg=artemis



View it on GitLab: https://salsa.debian.org/med-team/artemis/-/compare/d96dcd20e930faf20a28c897a7b7f6f19d2abc43...896db2097b9be77e7d77e5e386d883d42b680d76

-- 
View it on GitLab: https://salsa.debian.org/med-team/artemis/-/compare/d96dcd20e930faf20a28c897a7b7f6f19d2abc43...896db2097b9be77e7d77e5e386d883d42b680d76
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