Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
1b653abc by Andreas Tille at 2021-04-27T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,32 +1,32 @@
-Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
+Last-Update: Tue, 27 Apr 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 180 | {covid-19,imaging} |
- orthanc | 94 | {covid-19,practice,imaging} |
- orthanc-wsi | 50 | {laboratory,imaging,his,oncology,covid-19,practice} |
- gdcm | 48 | {imaging-dev} |
- openslide | 41 | {imaging} |
- amide | 35 | {imaging} |
- nipype | 34 | {imaging,imaging-dev} |
- dicom3tools | 31 | {imaging} |
- dicomscope | 27 | {imaging} |
- htsjdk | 24 | {bio-dev} |
- dcm2niix | 21 | {imaging} |
- gdcm | 16 | {covid-19,imaging} |
- odin | 16 | {imaging-dev,imaging} |
+ dcmtk | 178 | {covid-19,imaging} |
+ orthanc | 92 | {covid-19,practice,imaging} |
+ orthanc-wsi | 49 | {laboratory,imaging,his,oncology,covid-19,practice} |
+ gdcm | 47 | {imaging-dev} |
+ openslide | 43 | {imaging} |
+ amide | 37 | {imaging} |
+ nipype | 35 | {imaging,imaging-dev} |
+ dicom3tools | 32 | {imaging} |
+ dicomscope | 28 | {imaging} |
+ htsjdk | 25 | {bio-dev} |
+ dcm2niix | 22 | {imaging} |
+ gdcm | 17 | {covid-19,imaging} |
+ odin | 17 | {imaging-dev,imaging} |
gdcm | 15 | {imaging-dev} |
- minc-tools | 14 | {imaging} |
+ minc-tools | 15 | {imaging} |
+ pixelmed | 13 | {imaging} |
dicomnifti | 12 | {imaging} |
gnumed-server | 12 | {practice,covid-19} |
invesalius | 12 | {imaging} |
- orthanc-webviewer | 12 | {imaging} |
- pixelmed | 12 | {imaging} |
+ vtk-dicom | 12 | {imaging} |
adun.app | 11 | {bio} |
+ insighttoolkit4 | 11 | {imaging-dev} |
+ mia | 11 | {imaging} |
nifticlib | 11 | {imaging} |
- vtk-dicom | 11 | {imaging} |
- insighttoolkit4 | 10 | {imaging-dev} |
- mia | 10 | {imaging} |
+ orthanc-webviewer | 11 | {imaging} |
ngs-sdk | 9 | {bio-dev} |
nifti2dicom | 9 | {imaging} |
plastimatch | 9 | {imaging} |
@@ -36,28 +36,25 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
ngs-sdk | 7 | {bio-dev} |
treeview | 7 | {bio,bio-phylogeny} |
salmid | 6 | {bio} |
+ bamkit | 5 | {covid-19,bio} |
blasr | 5 | {bio-ngs,bio} |
+ jebl2 | 5 | {bio-dev} |
lagan | 5 | {bio} |
librg-utils-perl | 5 | {bio} |
melting | 5 | {cloud,bio} |
ngs-sdk | 5 | {bio-dev} |
- obitools | 5 | {bio} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
- bamkit | 4 | {covid-19,bio} |
+ rambo-k | 5 | {bio} |
bart-view | 4 | {imaging} |
biomaj3-cli | 4 | {cloud} |
busco | 4 | {covid-19,bio} |
ea-utils | 4 | {bio} |
embassy-domainatrix | 4 | {bio,cloud} |
- jebl2 | 4 | {bio-dev} |
king | 4 | {imaging,typesetting} |
- libncl | 4 | {bio} |
nifticlib | 4 | {imaging-dev} |
- orthanc-mysql | 4 | {imaging} |
+ obitools | 4 | {bio} |
pymia | 4 | {imaging-dev} |
- rambo-k | 4 | {bio} |
salmon | 4 | {bio,covid-19} |
- staden | 4 | {bio} |
beast-mcmc | 3 | {bio-phylogeny,bio} |
biojava-live | 3 | {bio-dev} |
bitseq | 3 | {bio} |
@@ -68,12 +65,15 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
getdata | 3 | {bio} |
jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
- opencfu | 3 | {laboratory} |
+ libncl | 3 | {bio} |
openslide | 3 | {imaging-dev} |
+ orthanc-mysql | 3 | {imaging} |
orthanc-postgresql | 3 | {imaging} |
oscar | 3 | {data,practice,tools} |
pbdagcon | 3 | {bio} |
phast | 3 | {bio} |
+ plasmidid | 3 | {covid-19,bio} |
+ staden | 3 | {bio} |
tracetuner | 3 | {bio} |
anfo | 2 | {bio,cloud} |
arden | 2 | {cloud,bio} |
@@ -86,11 +86,12 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
libpal-java | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
microbegps | 2 | {bio} |
+ opencfu | 2 | {laboratory} |
papyrus | 2 | {imaging-dev} |
perm | 2 | {bio,cloud} |
phyutility | 2 | {cloud,bio} |
piler | 2 | {bio} |
- plasmidid | 2 | {covid-19,bio} |
+ qcumber | 2 | {bio} |
rtax | 2 | {bio,cloud} |
saint | 2 | {bio} |
samtools-legacy | 2 | {bio-dev} |
@@ -118,6 +119,7 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
ipig | 1 | {bio} |
jmodeltest | 1 | {bio-phylogeny,bio} |
libchado-perl | 1 | {bio-dev} |
+ libmuscle | 1 | {bio-dev} |
librdp-taxonomy-tree-java | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
@@ -130,7 +132,6 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
prime-phylo | 1 | {cloud,bio} |
proalign | 1 | {bio,bio-phylogeny} |
python-wdlparse | 1 | {bio-dev} |
- qcumber | 1 | {bio} |
quorum | 1 | {bio} |
rdp-alignment | 1 | {bio} |
rdp-classifier | 1 | {bio} |
@@ -144,6 +145,7 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
spaced | 1 | {bio} |
suitename | 1 | {bio} |
tvc | 1 | {bio} |
+ varna | 1 | {bio} |
vienna-rna | 1 | {bio,covid-19} |
vtk-dicom | 1 | {imaging-dev} |
yaha | 1 | {bio} |
@@ -185,7 +187,6 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
libmaus2 | 0 | {covid-19,bio-dev} |
libmems | 0 | {bio-dev} |
libmialm | 0 | {imaging-dev} |
- libmuscle | 0 | {bio-dev} |
libncl | 0 | {bio-dev} |
libpsortb | 0 | {bio-dev} |
libqes | 0 | {bio-dev} |
@@ -233,7 +234,6 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
thesias | 0 | {bio,covid-19} |
tophat-recondition | 0 | {covid-19,bio} |
trace2dbest | 0 | {bio} |
- varna | 0 | {bio} |
varscan | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
yanagiba | 0 | {bio,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1b653abcd8c75766faa6a88fc2cd045beae838f4
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1b653abcd8c75766faa6a88fc2cd045beae838f4
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