[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Thu Aug 12 14:42:25 BST 2021



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
ac371205 by Andreas Tille at 2021-08-12T13:42:20+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,48 +1,47 @@
-Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
+Last-Update: Thu, 12 Aug 2021 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    171 | {covid-19,imaging}                                  | 
+ dcmtk                         |    175 | {covid-19,imaging}                                  | 
  orthanc                       |    101 | {imaging,covid-19,practice}                         | 
- orthanc-wsi                   |     50 | {imaging,practice,his,covid-19,oncology,laboratory} | 
+ orthanc-wsi                   |     49 | {imaging,practice,his,covid-19,oncology,laboratory} | 
  gdcm                          |     32 | {imaging-dev}                                       | 
+ amide                         |     28 | {imaging}                                           | 
  dicom3tools                   |     28 | {imaging}                                           | 
  htsjdk                        |     28 | {bio-dev}                                           | 
- dcm2niix                      |     27 | {imaging}                                           | 
- amide                         |     26 | {imaging}                                           | 
- dicomscope                    |     24 | {imaging}                                           | 
+ dcm2niix                      |     26 | {imaging}                                           | 
+ dicomscope                    |     25 | {imaging}                                           | 
  gdcm                          |     24 | {covid-19,imaging}                                  | 
  odin                          |     22 | {imaging-dev,imaging}                               | 
  minc-tools                    |     17 | {imaging}                                           | 
- insighttoolkit4               |     16 | {imaging-dev}                                       | 
  nifticlib                     |     16 | {imaging}                                           | 
  orthanc-webviewer             |     16 | {imaging}                                           | 
- gnumed-server                 |     14 | {covid-19,practice}                                 | 
+ insighttoolkit4               |     14 | {imaging-dev}                                       | 
  dicomnifti                    |     13 | {imaging}                                           | 
  invesalius                    |     13 | {imaging}                                           | 
+ gdcm                          |     12 | {imaging-dev}                                       | 
+ gnumed-server                 |     12 | {covid-19,practice}                                 | 
  pixelmed                      |     12 | {imaging}                                           | 
- gdcm                          |     11 | {imaging-dev}                                       | 
  mia                           |     11 | {imaging}                                           | 
  openslide                     |     11 | {imaging}                                           | 
  adun.app                      |     10 | {bio}                                               | 
  nifti2dicom                   |     10 | {imaging}                                           | 
- libminc                       |      9 | {imaging-dev}                                       | 
- ngs-sdk                       |      9 | {bio-dev}                                           | 
  plastimatch                   |      9 | {imaging}                                           | 
- salmid                        |      9 | {bio}                                               | 
+ king                          |      8 | {imaging,typesetting}                               | 
+ libminc                       |      8 | {imaging-dev}                                       | 
  ngs-sdk                       |      8 | {bio-dev}                                           | 
- nifticlib                     |      8 | {imaging-dev}                                       | 
- orthanc-dicomweb              |      8 | {covid-19,imaging}                                  | 
+ salmid                        |      8 | {bio}                                               | 
  busco                         |      7 | {bio,covid-19}                                      | 
- king                          |      7 | {imaging,typesetting}                               | 
  nifti2dicom                   |      7 | {imaging}                                           | 
+ nifticlib                     |      7 | {imaging-dev}                                       | 
+ orthanc-dicomweb              |      7 | {covid-19,imaging}                                  | 
  ea-utils                      |      6 | {bio}                                               | 
  jebl2                         |      6 | {bio-dev}                                           | 
  melting                       |      6 | {cloud,bio}                                         | 
- orthanc-postgresql            |      6 | {imaging}                                           | 
  dicompyler                    |      5 | {oncology}                                          | 
  elastix                       |      5 | {imaging}                                           | 
- orthanc-mysql                 |      5 | {imaging}                                           | 
+ librg-utils-perl              |      5 | {bio}                                               | 
+ orthanc-postgresql            |      5 | {imaging}                                           | 
  oscar                         |      5 | {tools,data,practice}                               | 
  pymia                         |      5 | {imaging-dev}                                       | 
  bart-view                     |      4 | {imaging}                                           | 
@@ -53,6 +52,7 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  lagan                         |      4 | {bio}                                               | 
  libsbml                       |      4 | {bio-dev}                                           | 
  obitools                      |      4 | {bio}                                               | 
+ orthanc-mysql                 |      4 | {imaging}                                           | 
  phyutility                    |      4 | {bio,cloud}                                         | 
  rdp-alignment                 |      4 | {bio}                                               | 
  saint                         |      4 | {bio}                                               | 
@@ -75,7 +75,6 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  lamarc                        |      3 | {bio}                                               | 
  libpal-java                   |      3 | {bio-dev}                                           | 
  librdp-taxonomy-tree-java     |      3 | {bio-dev}                                           | 
- librg-utils-perl              |      3 | {bio}                                               | 
  mauve-aligner                 |      3 | {bio}                                               | 
  ngs-sdk                       |      3 | {bio-dev}                                           | 
  nipype                        |      3 | {imaging-dev,imaging}                               | 
@@ -83,7 +82,6 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  piler                         |      3 | {bio}                                               | 
  proalign                      |      3 | {bio,bio-phylogeny}                                 | 
  rdp-classifier                |      3 | {bio}                                               | 
- runcircos-gui                 |      3 | {bio}                                               | 
  sight                         |      3 | {imaging}                                           | 
  staden                        |      3 | {bio}                                               | 
  tracetuner                    |      3 | {bio}                                               | 
@@ -121,6 +119,7 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  quorum                        |      2 | {bio}                                               | 
  rambo-k                       |      2 | {bio}                                               | 
  rtax                          |      2 | {cloud,bio}                                         | 
+ runcircos-gui                 |      2 | {bio}                                               | 
  samblaster                    |      2 | {covid-19,bio}                                      | 
  segemehl                      |      2 | {bio}                                               | 
  sga                           |      2 | {bio}                                               | 
@@ -150,6 +149,7 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  libgkarrays                   |      1 | {bio-dev}                                           | 
  libhmsbeagle                  |      1 | {bio-dev}                                           | 
  libmems                       |      1 | {bio-dev}                                           | 
+ libseqlib                     |      1 | {bio-dev}                                           | 
  libstatgen                    |      1 | {bio-dev}                                           | 
  libvistaio                    |      1 | {imaging-dev}                                       | 
  metaphlan2                    |      1 | {bio}                                               | 
@@ -166,6 +166,7 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  python-bcbio-gff              |      1 | {bio-dev}                                           | 
  sambamba                      |      1 | {bio}                                               | 
  shovill                       |      1 | {bio,covid-19}                                      | 
+ simpleitk                     |      1 | {imaging-dev}                                       | 
  skesa                         |      1 | {bio}                                               | 
  skewer                        |      1 | {bio}                                               | 
  sprai                         |      1 | {bio}                                               | 
@@ -202,7 +203,6 @@ Last-Update: Thu, 12 Aug 2021 01:42:03 +0000
  libncl                        |      0 | {bio-dev}                                           | 
  libpsortb                     |      0 | {bio-dev}                                           | 
  libqes                        |      0 | {bio-dev}                                           | 
- libseqlib                     |      0 | {bio-dev}                                           | 
  libxdf                        |      0 | {imaging-dev}                                       | 
  metastudent-data              |      0 | {bio}                                               | 
  metastudent-data-2            |      0 | {bio}                                               | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ac371205d3c2797d5592d0420f1796f6554afcd8

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ac371205d3c2797d5592d0420f1796f6554afcd8
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