[med-svn] [Git][med-team/beast2-mcmc][master] 7 commits: New upstream version 2.6.6+dfsg

[Pierre Gruet (@pgt)]

Pierre Gruet pushed to branch master at Debian Med / beast2-mcmc


Commits:
8a2f5ab1 by Pierre Gruet at 2021-08-19T11:00:11+02:00
New upstream version 2.6.6+dfsg
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fbe8ca3c by Pierre Gruet at 2021-08-19T11:00:51+02:00
Update upstream source from tag 'upstream/2.6.6+dfsg'

Update to upstream version '2.6.6+dfsg'
with Debian dir b27d718b4d617eb00aaa049e1d1fcff201cdb195
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247b6f3f by Pierre Gruet at 2021-08-19T11:04:13+02:00
Using my debian.org email address

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baab3fb7 by Pierre Gruet at 2021-08-19T11:14:31+02:00
Raising Standards version to 4.6.0 (no change)

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f6e89444 by Pierre Gruet at 2021-08-19T17:10:46+02:00
exporting LC_ALL in d/rules to care for unmappable characters in source

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63018abb by Pierre Gruet at 2021-08-19T17:11:18+02:00
Refreshing patches

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35ac7c9e by Pierre Gruet at 2021-08-19T17:53:14+02:00
Upload to unstable

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30 changed files:

- + .github/workflows/beauti.yml
- + .github/workflows/core.yml
- − .travis.yml
- Dockerfile
- README.md
- + build-testing.xml
- build.xml
- debian/changelog
- debian/control
- debian/patches/accents_in_source.patch
- debian/patches/adapt_source_to_Debian_jar_path.patch
- debian/patches/fix_classpath_in_build_xml.patch
- debian/patches/handling_minor_issues_in_tests.patch
- debian/patches/remove_appbundler.patch
- debian/patches/remove_import_swing_security.patch
- debian/patches/remove_jsign_from_build.patch
- debian/rules
- debian/tests/run-build-tests
- doc/tutorials/EBSP/scripts/plotEBSP.R
- examples/testUCLNclock.json
- release/Linux/bin/applauncher
- release/Linux/bin/densitree
- release/Linux/jrebin/applauncher
- release/Linux/jrebin/beast
- release/Linux/jrebin/beauti
- release/Linux/jrebin/densitree
- release/Linux/jrebin/loganalyser
- release/Linux/jrebin/logcombiner
- release/Linux/jrebin/packagemanager
- release/Linux/jrebin/treeannotator


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/-/compare/6357c7510f8740102a45e001f598574b27d55780...35ac7c9e286e5f0e2198a52b2bce15d6a476c620

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View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/-/compare/6357c7510f8740102a45e001f598574b27d55780...35ac7c9e286e5f0e2198a52b2bce15d6a476c620
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