[med-svn] [Git][med-team/qiime][master] Update TODO

Steffen Möller (@moeller) gitlab at salsa.debian.org
Thu Aug 19 19:29:36 BST 2021



Steffen Möller pushed to branch master at Debian Med / qiime


Commits:
78048899 by Steffen Möller at 2021-08-19T18:29:31+00:00
Update TODO
- - - - -


1 changed file:

- debian/TODO


Changes:

=====================================
debian/TODO
=====================================
@@ -5,16 +5,17 @@ Plugins already accepted (added to the dependencies of qiime)
 ________________________
 
  - q2cli       - Click-based command line interface for QIIME 2
- - q2-cutadapt - QIIME 2 plugin to work with adapters in sequence data
- - q2-types    - QIIME 2 plugin defining types for microbiome analysis
-
  - q2templates       - Design template package for QIIME 2 Plugins
- - q2-metadata       - QIIME 2 plugin for working with and visualizing Metadata
+ - q2-cutadapt - QIIME 2 plugin to work with adapters in sequence data
  - q2-demux          - QIIME 2 plugin for demultiplexing of sequence reads
  - q2-quality-filter - QIIME2 plugin for PHRED-based filtering and trimming
  - q2-feature-classifier - QIIME 2 plugin supporting taxonomic classification
  - q2-feature-table  - QIIME 2 plugin supporting operations on feature tables
+ - q2-metadata       - QIIME 2 plugin for working with and visualizing Metadata
+ - q2-quality-control (deps: q2-taxa)
+ - q2-sample-classifier (deps: q2-feature-table)
  - q2-taxa (D3-scale-chromatic, thenBy, natural-sort JavaScript dependencies)
+ - q2-types    - QIIME 2 plugin defining types for microbiome analysis
 
 
 Plugins already in the NEW QUEUE
@@ -26,22 +27,20 @@ Work presumed ready for upload
 
  - q2-composition (https://github.com/qiime2/q2-composition)
  
- - q2-sample-classifier (deps: q2-feature-table)
-
  - q2-emperor
  - EMPEROR (https://github.com/biocore/emperor)
 
  - q2-dada2:
     No excuse any more: DADA2 (R package) surfaced as r-bioc-dada2
 
- - q2-quality-control (deps: q2-taxa)
-
  - q2-fragment-insertion (only the first release)
 
  - q2-diversity (deps: q2-feature-table, q2-emperor)
 
  - q2-longitudinal (deps: q2-feature-table, q2-sample-classifier)
 
+ - unifrac (python)
+
 The work already started
 ________________________
 



View it on GitLab: https://salsa.debian.org/med-team/qiime/-/commit/7804889973146ead58a4a05340d5b181791dd27e

-- 
View it on GitLab: https://salsa.debian.org/med-team/qiime/-/commit/7804889973146ead58a4a05340d5b181791dd27e
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