[med-svn] [Git][med-team/python-biopython][master] 5 commits: d/t/control: depend on @builddeps@

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / python-biopython


Commits:
45bba09f by Étienne Mollier at 2021-08-22T18:12:10+02:00
d/t/control: depend on @builddeps@

instead of the full list of relevant build dependencies.  This will be
much more maintainable.

Gbp-Dch: ignore

- - - - -
d5155228 by Étienne Mollier at 2021-08-22T18:57:17+02:00
routine-update: Standards-Version: 4.6.0

- - - - -
1f4b49a7 by Étienne Mollier at 2021-08-22T18:57:34+02:00
Use secure URI in Homepage field.

Changes-By: lintian-brush
Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html

- - - - -
e1b391ac by Étienne Mollier at 2021-08-22T19:49:29+02:00
d/watch: fix broken watch file for real

Gbp-Dch: ignore

- - - - -
f42bb1dc by Étienne Mollier at 2021-08-22T21:56:53+02:00
ready to upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/tests/control
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,10 +1,12 @@
-python-biopython (1.78+dfsg-5) UNRELEASED; urgency=medium
+python-biopython (1.78+dfsg-5) unstable; urgency=medium
 
   * d/control: update uploader address
   * d/watch: fix broken url to github
   * d{,/tests}/control: add full_suite autopkgtest (Closes: #986410)
+  * Standards-Version: 4.6.0 (routine-update)
+  * Use secure URI in Homepage field.
 
- -- Étienne Mollier <emollier at debian.org>  Sat, 10 Jul 2021 00:04:06 +0200
+ -- Étienne Mollier <emollier at debian.org>  Sun, 22 Aug 2021 21:56:28 +0200
 
 python-biopython (1.78+dfsg-4) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -47,10 +47,10 @@ Build-Depends: debhelper-compat (= 13),
                samtools <!nocheck>,
                t-coffee <!nocheck>,
                wise <!nocheck>
-Standards-Version: 4.5.1
+Standards-Version: 4.6.0
 Vcs-Browser: https://salsa.debian.org/med-team/python-biopython
 Vcs-Git: https://salsa.debian.org/med-team/python-biopython.git
-Homepage: http://biopython.org
+Homepage: https://biopython.org
 Rules-Requires-Root: no
 
 Package: python3-biopython


=====================================
debian/tests/control
=====================================
@@ -8,37 +8,5 @@ Restrictions: allow-stderr
 # list of build-dependencies from d/control; see #986410 for a rationale..
 Features: test-name=full_suite
 Test-Command: sh debian/tests/run-unit-test
-Depends: @, python3-setuptools, python3-all,
-         python3-numpy,
-         python3-reportlab,
-         hevea,
-         bwa,
-         clustalo,
-         clustalw,
-         dialign,
-         dssp (>= 4.0.0),
-         emboss,
-         fasttree,
-         mafft,
-         muscle,
-         ncbi-blast+ (>= 2.10.1-3),
-         phylip,
-         phyml [any-amd64 any-i386],
-         prank,
-         probcons,
-         python3-networkx,
-         python3-mysqldb,
-         python3-matplotlib,
-         python3-mmtf,
-         python3-pil,
-         python3-rdflib,
-         python3-renderpm,
-         python3-psycopg2,
-         python3-pygments,
-         python3-scipy,
-         python3-unittest2,
-         raxml [any-amd64 any-i386],
-         samtools,
-         t-coffee,
-         wise
+Depends: @, @builddeps@
 Restrictions: allow-stderr, skip-not-installable


=====================================
debian/watch
=====================================
@@ -1,5 +1,11 @@
 version=4
-opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%,\
-dversionmangle=s/\+dfsg//" \
+
+opts="\
+filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%,\
+uversionmangle=s/b/~b/;s/(\d)(\d+)/$1.$2/,\
+repacksuffix=+dfsg,\
+dversionmangle=s/\+dfsg//,\
+repack,\
+compression=xz" \
 	https://github.com/biopython/biopython/tags \
-	(?:.*?/)?v?(\d[\d.]*)\.tar\.gz debian uupdate
+	(?:.*?/)?biopython[v-]?(\d[\d.]*)\.tar\.gz debian uupdate



View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/82d5c84e8466581b296c043c07b8aab7f7dc4212...f42bb1dc3e6b562b74881ae3a9bead1e66ed167d

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/82d5c84e8466581b296c043c07b8aab7f7dc4212...f42bb1dc3e6b562b74881ae3a9bead1e66ed167d
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