[med-svn] [Git][med-team/kmerresistance][master] 2 commits: also inject CPPFLAGS in hardening.patch

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / kmerresistance


Commits:
3fad03a6 by Étienne Mollier at 2021-08-24T13:36:12+02:00
also inject CPPFLAGS in hardening.patch

this fixes blhc issues, and allows us to fortify kmerresistance.

- - - - -
19918e89 by Étienne Mollier at 2021-08-24T13:38:16+02:00
update changelog

- - - - -


2 changed files:

- debian/changelog
- debian/patches/hardening.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -5,8 +5,9 @@ kmerresistance (2.2.0-3) UNRELEASED; urgency=medium
     supported by kma.
   * d/salsa-ci.yml: disable i386 checks; kma will become missing, preventing
     a proper build to happen.
+  * inject CPPFLAGS through hardening.patch; fortify kmerresistance.
 
- -- Étienne Mollier <emollier at debian.org>  Tue, 24 Aug 2021 13:12:22 +0200
+ -- Étienne Mollier <emollier at debian.org>  Tue, 24 Aug 2021 13:37:03 +0200
 
 kmerresistance (2.2.0-2) unstable; urgency=medium
 


=====================================
debian/patches/hardening.patch
=====================================
@@ -1,21 +1,23 @@
 Description: propagation of Debian build options
 Author: Andreas Tille <tille at debian.org>
-Last-Update: Mon, 24 Jun 2019 07:52:45 +0200
+Reviewed-By: Étienne Mollier <emollier at debian.org>
+Forwarded: not-needed
+Last-Update: 2021-08-24
 
---- a/Makefile
-+++ b/Makefile
+--- kmerresistance.orig/Makefile
++++ kmerresistance/Makefile
 @@ -1,4 +1,4 @@
 -CFLAGS = -Wall -O3 -std=c99
 +CFLAGS += -Wall -O3 -std=c99
  BINS = kmerresistance
  LIBS = pherror.o qseqs.o
  
-@@ -8,7 +8,7 @@ LIBS = pherror.o qseqs.o
+@@ -8,7 +8,7 @@
  all: $(BINS)
  
  kmerresistance: KmerResistance.c $(LIBS)
 -	$(CC) $(CFLAGS) -o $@ $< $(LIBS) -lm
-+	$(CC) $(CFLAGS) -o $@ $< $(LIBS) -lm $(LDFLAGS)
++	$(CC) $(CPPFLAGS) $(CFLAGS) -o $@ $< $(LIBS) -lm $(LDFLAGS)
  
  clean:
  	$(RM) $(BINS) $(LIBS)



View it on GitLab: https://salsa.debian.org/med-team/kmerresistance/-/compare/8b134a9d0a0ab481e8ba569a5174fcda5fb837c0...19918e89d0290d4aecb679093c8d420a8901086e

-- 
View it on GitLab: https://salsa.debian.org/med-team/kmerresistance/-/compare/8b134a9d0a0ab481e8ba569a5174fcda5fb837c0...19918e89d0290d4aecb679093c8d420a8901086e
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