[med-svn] [Git][med-team/ivar][master] Get ivar building

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch master at Debian Med / ivar


Commits:
92a30f82 by Nilesh Patra at 2021-08-28T02:37:09+05:30
Get ivar building

- - - - -


2 changed files:

- + debian/patches/Fix-warning.patch
- + debian/patches/series


Changes:

=====================================
debian/patches/Fix-warning.patch
=====================================
@@ -0,0 +1,14 @@
+Description: Initialise array in testfile explicitly to empty string array
+Author: Nilesh Patra <nilesh at debian.org>
+Last-Update: 2021-08-28
+--- a/tests/test_variants.cpp
++++ b/tests/test_variants.cpp
+@@ -31,7 +31,7 @@
+   // Quality threshold 25. Frequency threshold: 0.03. Total_DP = 2. Freq = 0.5 No Indel.
+   std::string t_25_03[3] = {"test\t210\tA\tT\t1\t1\t41\t1\t1\t58\t0.5\t2\t0.4\tFALSE\tid-test3\tAAG\tK\tATG\tM", "test\t210\tA\tT\t1\t1\t41\t1\t1\t58\t0.5\t2\t0.4\tFALSE\tid-testedit1\tGAA\tE\tGAT\tD", "test\t210\tA\tT\t1\t1\t41\t1\t1\t58\t0.5\t2\t0.4\tFALSE\tid-testedit2\tAGA\tR\tTGA\t*"};
+   // Minimum depth threshold. Should be empty
+-  std::string t_25_03_20[] = {};
++  std::string t_25_03_20[] = {""};
+   num_success = call_var_check_outfile("../data/test.indel", 20, 0, 0.02, t_20_02_1, 4);
+   std::cout << num_success << std::endl;
+   num_success += call_var_check_outfile("../data/test.indel", 20, 0, 0.03, t_20_03, 3);


=====================================
debian/patches/series
=====================================
@@ -0,0 +1 @@
+Fix-warning.patch



View it on GitLab: https://salsa.debian.org/med-team/ivar/-/commit/92a30f8208c52a39333a8c38b2ae7c2bda2e1a1c

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View it on GitLab: https://salsa.debian.org/med-team/ivar/-/commit/92a30f8208c52a39333a8c38b2ae7c2bda2e1a1c
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