[med-svn] [Git][med-team/ncbi-blastplus][master] 9 commits: New upstream version 2.12.0+ds

[Aaron M. Ucko (@ucko)]

Aaron M. Ucko pushed to branch master at Debian Med / ncbi-blastplus


Commits:
12379a63 by Aaron M. Ucko at 2021-12-01T21:31:19-05:00
New upstream version 2.12.0+ds
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503a59b0 by Aaron M. Ucko at 2021-12-01T21:35:17-05:00
Merge tag 'upstream/2.12.0+ds'

Upstream version 2.12.0(+ds).

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ce70ead6 by Aaron M. Ucko at 2021-12-01T22:25:37-05:00
debian/patches: Update for new upstream release (2.12.0[+ds]).

* fix_lib_deps, fix_unit_tests, spelling: Formally refresh to eliminate
  fuzz.
* fix_x86isms: Retire (fully incorporated upstream.)
* run_perl_directly: Formally update to reflect current $Id$ comment.
* support_x32: Forward-port.
* tune_lmdb_defaults: Keep just the MIPS tuneup; upstream's settings
  should now be fine elsewhere.

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47fc6033 by Aaron M. Ucko at 2021-12-01T22:25:37-05:00
routine-update: Standards-Version: 4.6.0

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71dab573 by Aaron M. Ucko at 2021-12-01T22:25:37-05:00
routine-update: watch file standard 4

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4527262a by Aaron M. Ucko at 2021-12-01T22:25:37-05:00
Suppress the mbed TLS version check too (#1000358).

Rename debian/patches/suppress_gnutls_version_check to
suppress_tls_version_checks accordingly.

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3bebe572 by Aaron M. Ucko at 2021-12-01T22:25:37-05:00
debian/watch: Correct filenamemangle.

Wrong syntax for multiple rules, and leading components left unstripped.

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4d6d6a62 by Aaron M. Ucko at 2021-12-01T22:32:08-05:00
Simplify c++/src/html/ncbi_menu*.js overrides per current Lintian.

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abe4801f by Aaron M. Ucko at 2021-12-01T22:32:35-05:00
Finalize ncbi-blast+ 2.12.0+ds-1 for unstable.

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30 changed files:

- c++/compilers/unix/Clang.sh
- c++/compilers/unix/GCC.sh
- − c++/compilers/vs2015/msvcvars.bat
- c++/compilers/vs2017/dll/build/UtilityProjects/_CONFIGURE_.vcxproj
- c++/compilers/vs2017/dll/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj
- c++/compilers/vs2017/dll/build/gbench/UtilityProjects/_CONFIGURE_.vcxproj
- c++/compilers/vs2017/dll/build/gbench/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj
- c++/compilers/vs2017/dll/build/gbench/gbench_install/gbench-install.vcxproj
- c++/compilers/vs2017/dll/build/gui/UtilityProjects/_CONFIGURE_.vcxproj
- c++/compilers/vs2017/dll/build/gui/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj
- c++/compilers/vs2017/dll/build/internal/gbench/gbench_install_internal/gbench-install-internal.vcxproj
- c++/compilers/vs2017/dll/third_party_dll_install.vcxproj
- c++/compilers/vs2017/dll/third_party_msvcdll_install.vcxproj
- c++/compilers/vs2017/msvcvars.bat
- c++/compilers/vs2017/ptb.bat
- c++/compilers/vs2017/static/build/UtilityProjects/_CONFIGURE_.vcxproj
- c++/compilers/vs2017/static/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj
- c++/compilers/vs2017/static/build/build-system/project_tree_builder/msbuild/msbuild_dataobj.lib.vcxproj
- c++/compilers/vs2017/static/build/build-system/project_tree_builder/project_tree_builder.exe.vcxproj
- c++/compilers/vs2017/static/build/corelib/xncbi.lib.vcxproj
- c++/compilers/vs2017/static/build/gui/UtilityProjects/_CONFIGURE_.vcxproj
- c++/compilers/vs2017/static/build/gui/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj
- c++/compilers/vs2017/static/build/serial/datatool/datatool.exe.vcxproj
- c++/compilers/vs2017/static/build/serial/xser.lib.vcxproj
- c++/compilers/vs2017/static/build/util/regexp/regexp.lib.vcxproj
- c++/compilers/vs2017/static/build/util/xregexp/xregexp.lib.vcxproj
- c++/compilers/vs2017/static/build/util/xutil.lib.vcxproj
- c++/compilers/vs2017/static/third_party_msvcstatic_install.vcxproj
- c++/compilers/vs2017/static/third_party_static_install.vcxproj
- c++/compilers/vs2017/user/build/UtilityProjects/_CONFIGURE_.vcxproj


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/-/compare/82cff93c9b680d82167e9e4e41a0e2b39bb60dde...abe4801f7dee38139c6d3c38c0f4774946d53971

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View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/-/compare/82cff93c9b680d82167e9e4e41a0e2b39bb60dde...abe4801f7dee38139c6d3c38c0f4774946d53971
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