[med-svn] [Git][med-team/picard-tools][master] 3 commits: Removing now unused versioned dependencies

Pierre Gruet (@pgt) gitlab at salsa.debian.org
Sat Dec 4 20:40:24 GMT 2021



Pierre Gruet pushed to branch master at Debian Med / picard-tools


Commits:
82d0deef by Pierre Gruet at 2021-12-03T15:31:01+01:00
Removing now unused versioned dependencies

- - - - -
2ecf45b7 by Pierre Gruet at 2021-12-04T01:17:26+01:00
Deleting the main class name in the jar invocation by PicardCommandLine

- - - - -
3500e888 by Pierre Gruet at 2021-12-04T21:40:04+01:00
Upload to unstable

- - - - -


3 changed files:

- debian/bin/PicardCommandLine
- debian/changelog
- debian/control


Changes:

=====================================
debian/bin/PicardCommandLine
=====================================
@@ -39,4 +39,4 @@ esac
 export USE_LIBRARY_PATH=USE_LIBRARY_PATH
 export PICARD_JAR=/usr/share/java/picard.jar
 
-exec java ${JAVA_OPTIONS-} $JavOpt -jar $PICARD_JAR picard.cmdline.PicardCommandLine $PicardProg $PicardOpts
+exec java ${JAVA_OPTIONS-} $JavOpt -jar $PICARD_JAR $PicardProg $PicardOpts


=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+picard-tools (2.26.6+dfsg-2) unstable; urgency=medium
+
+  * Removing now useless versioned dependencies
+  * Deleting the main class name in the jar invocation by PicardCommandLine
+
+ -- Pierre Gruet <pgt at debian.org>  Sat, 04 Dec 2021 10:21:59 +0100
+
 picard-tools (2.26.6+dfsg-1) unstable; urgency=medium
 
   [ Pierre Gruet ]


=====================================
debian/control
=====================================
@@ -8,7 +8,7 @@ Uploaders: Charles Plessy <plessy at debian.org>,
            Pierre Gruet <pgt at debian.org>
 Section: science
 Priority: optional
-Build-Depends: default-jdk (>= 2:1.9~),
+Build-Depends: default-jdk,
                debhelper-compat (= 13),
                javahelper,
                gradle-debian-helper,
@@ -27,7 +27,7 @@ Build-Depends: default-jdk (>= 2:1.9~),
                libhtsjdk-java (>= 2.22.0~),
                libjoptsimple-java,
 # required for tests:
-               testng (>= 6.9.10),
+               testng,
                r-base-core,
 # required for links and dependencies in documentation:
                default-jdk-doc,
@@ -106,8 +106,6 @@ Depends: ${misc:Depends},
 Recommends: ${java:Recommends},
             r-base-core
 Suggests: picard-tools
-Breaks: picard-tools (<< 1.114)
-Replaces: picard-tools (<< 1.114)
 Description: Java library to manipulate SAM and BAM files
  SAM (Sequence Alignment/Map) format is a generic format for storing
  large nucleotide sequence alignments. This library provides classes to



View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/compare/cce55ffb44014102a84715981b8bd715d55cd4a6...3500e8887eff09c0d49270c951f6a6cdae52798e

-- 
View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/compare/cce55ffb44014102a84715981b8bd715d55cd4a6...3500e8887eff09c0d49270c951f6a6cdae52798e
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