Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d8489376 by Andreas Tille at 2021-12-17T13:42:22+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,56 +1,54 @@
-Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
+Last-Update: Fri, 17 Dec 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 168 | {imaging,covid-19} |
- orthanc | 93 | {covid-19,practice,imaging} |
- orthanc-wsi | 49 | {covid-19,oncology,his,laboratory,practice,imaging} |
- amide | 31 | {imaging} |
- htsjdk | 30 | {bio-dev} |
+ dcmtk | 169 | {imaging,covid-19} |
+ orthanc | 95 | {covid-19,practice,imaging} |
+ orthanc-wsi | 48 | {covid-19,oncology,his,laboratory,practice,imaging} |
+ amide | 30 | {imaging} |
dicom3tools | 28 | {imaging} |
- dcm2niix | 27 | {imaging} |
+ htsjdk | 28 | {bio-dev} |
+ dcm2niix | 26 | {imaging} |
dicomscope | 25 | {imaging} |
- gdcm | 20 | {imaging-dev} |
- gdcm | 18 | {imaging,covid-19} |
+ gdcm | 21 | {imaging-dev} |
+ gdcm | 17 | {imaging,covid-19} |
invesalius | 16 | {imaging} |
minc-tools | 15 | {imaging} |
- openslide | 15 | {imaging} |
gnumed-server | 14 | {covid-19,practice} |
+ openslide | 14 | {imaging} |
adun.app | 13 | {bio} |
mrtrix3 | 13 | {imaging} |
pixelmed | 13 | {imaging} |
gdcm | 12 | {imaging-dev} |
+ insighttoolkit4 | 12 | {imaging-dev} |
+ ngs-sdk | 12 | {bio-dev} |
orthanc-webviewer | 12 | {imaging} |
dicomnifti | 11 | {imaging} |
- insighttoolkit4 | 11 | {imaging-dev} |
- mia | 11 | {imaging} |
- ngs-sdk | 11 | {bio-dev} |
plastimatch | 11 | {imaging} |
jebl2 | 10 | {bio-dev} |
- biojava-live | 9 | {bio-dev} |
+ mia | 10 | {imaging} |
king | 9 | {typesetting,imaging} |
nifticlib | 9 | {imaging} |
+ biojava-live | 8 | {bio-dev} |
lagan | 7 | {bio} |
ngs-sdk | 7 | {bio-dev} |
- libncl | 6 | {bio} |
librg-utils-perl | 6 | {bio} |
nifticlib | 6 | {imaging-dev} |
- rambo-k | 6 | {bio} |
treeview | 6 | {bio,bio-phylogeny} |
dicompyler | 5 | {oncology} |
- embassy-domalign | 5 | {cloud,bio} |
libminc | 5 | {imaging-dev} |
+ libncl | 5 | {bio} |
nifti2dicom | 5 | {imaging} |
openslide | 5 | {imaging-dev} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
oscar | 5 | {data,tools,practice} |
+ rambo-k | 5 | {bio} |
runcircos-gui | 5 | {bio} |
salmon | 5 | {bio,covid-19} |
- tracetuner | 5 | {bio} |
- arden | 4 | {bio,cloud} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
elastix | 4 | {imaging} |
embassy-domainatrix | 4 | {cloud,bio} |
+ embassy-domalign | 4 | {cloud,bio} |
embassy-domsearch | 4 | {cloud,bio} |
melting | 4 | {cloud,bio} |
ngs-sdk | 4 | {bio-dev} |
@@ -61,14 +59,14 @@ Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
saint | 4 | {bio} |
sibsim4 | 4 | {bio,cloud} |
stacks | 4 | {bio} |
- staden | 4 | {bio} |
+ tracetuner | 4 | {bio} |
anfo | 3 | {bio,cloud} |
+ arden | 3 | {bio,cloud} |
bart-view | 3 | {imaging} |
bio-tradis | 3 | {bio,bio-dev} |
bitseq | 3 | {bio} |
brig | 3 | {bio} |
canu | 3 | {bio} |
- clonalorigin | 3 | {bio} |
gatb-core | 3 | {bio} |
getdata | 3 | {bio} |
ghmm | 3 | {bio} |
@@ -81,17 +79,20 @@ Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
mhap | 3 | {bio,bio-ngs} |
obitools | 3 | {bio} |
orthanc-postgresql | 3 | {imaging} |
+ piler | 3 | {bio} |
proalign | 3 | {bio,bio-phylogeny} |
pymia | 3 | {imaging-dev} |
rdp-classifier | 3 | {bio} |
rtax | 3 | {cloud,bio} |
spread-phy | 3 | {bio,bio-phylogeny} |
+ staden | 3 | {bio} |
zalign | 3 | {cloud,bio} |
assemblytics | 2 | {bio} |
biomaj3-cli | 2 | {cloud} |
blimps | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
clonalframeml | 2 | {bio,covid-19} |
+ clonalorigin | 2 | {bio} |
cmtk | 2 | {imaging} |
delly | 2 | {covid-19,bio} |
fastml | 2 | {bio} |
@@ -106,7 +107,6 @@ Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
orthanc-python | 2 | {covid-19} |
papyrus | 2 | {imaging-dev} |
pigx-rnaseq | 2 | {bio,covid-19} |
- piler | 2 | {bio} |
placnet | 2 | {bio} |
plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
@@ -120,7 +120,6 @@ Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
sprai | 2 | {bio} |
suitename | 2 | {bio} |
surankco | 2 | {bio} |
- thesias | 2 | {bio,covid-19} |
tvc | 2 | {bio} |
varna | 2 | {bio} |
acedb | 1 | {cloud,bio} |
@@ -139,10 +138,10 @@ Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
shovill | 1 | {covid-19,bio} |
skesa | 1 | {bio} |
spaln | 1 | {covid-19,bio} |
+ thesias | 1 | {bio,covid-19} |
tophat-recondition | 1 | {bio,covid-19} |
trace2dbest | 1 | {bio} |
varscan | 1 | {covid-19,bio} |
- vienna-rna | 1 | {bio,covid-19} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
@@ -203,6 +202,7 @@ Last-Update: Fri, 17 Dec 2021 01:42:04 +0000
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
+ vienna-rna | 0 | {bio,covid-19} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
mssstest | -1 | {tools} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d8489376c22deb68d66348a85ce12e0431388e8c
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d8489376c22deb68d66348a85ce12e0431388e8c
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