Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f4e6fc0e by Andreas Tille at 2021-12-18T13:42:22+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,92 +1,87 @@
-Last-Update: Sat, 18 Dec 2021 01:42:05 +0000
+Last-Update: Sat, 18 Dec 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 169 | {imaging,covid-19} |
- orthanc | 95 | {covid-19,practice,imaging} |
- orthanc-wsi | 48 | {covid-19,oncology,his,laboratory,practice,imaging} |
- amide | 30 | {imaging} |
- dicom3tools | 28 | {imaging} |
- htsjdk | 28 | {bio-dev} |
+ dcmtk | 172 | {imaging,covid-19} |
+ orthanc | 97 | {covid-19,practice,imaging} |
+ orthanc-wsi | 49 | {covid-19,oncology,his,laboratory,practice,imaging} |
+ amide | 29 | {imaging} |
+ htsjdk | 29 | {bio-dev} |
+ dicom3tools | 27 | {imaging} |
dcm2niix | 26 | {imaging} |
- dicomscope | 25 | {imaging} |
- gdcm | 21 | {imaging-dev} |
- gdcm | 17 | {imaging,covid-19} |
+ dicomscope | 26 | {imaging} |
+ gdcm | 20 | {imaging-dev} |
+ gdcm | 16 | {imaging,covid-19} |
invesalius | 16 | {imaging} |
- minc-tools | 15 | {imaging} |
gnumed-server | 14 | {covid-19,practice} |
- openslide | 14 | {imaging} |
- adun.app | 13 | {bio} |
+ minc-tools | 14 | {imaging} |
mrtrix3 | 13 | {imaging} |
- pixelmed | 13 | {imaging} |
+ openslide | 13 | {imaging} |
+ adun.app | 12 | {bio} |
gdcm | 12 | {imaging-dev} |
insighttoolkit4 | 12 | {imaging-dev} |
ngs-sdk | 12 | {bio-dev} |
orthanc-webviewer | 12 | {imaging} |
+ pixelmed | 12 | {imaging} |
dicomnifti | 11 | {imaging} |
plastimatch | 11 | {imaging} |
- jebl2 | 10 | {bio-dev} |
- mia | 10 | {imaging} |
- king | 9 | {typesetting,imaging} |
- nifticlib | 9 | {imaging} |
- biojava-live | 8 | {bio-dev} |
+ jebl2 | 9 | {bio-dev} |
+ mia | 9 | {imaging} |
+ nifticlib | 8 | {imaging} |
+ biojava-live | 7 | {bio-dev} |
+ king | 7 | {typesetting,imaging} |
lagan | 7 | {bio} |
ngs-sdk | 7 | {bio-dev} |
- librg-utils-perl | 6 | {bio} |
+ nifti2dicom | 6 | {imaging} |
nifticlib | 6 | {imaging-dev} |
treeview | 6 | {bio,bio-phylogeny} |
dicompyler | 5 | {oncology} |
libminc | 5 | {imaging-dev} |
libncl | 5 | {bio} |
+ librg-utils-perl | 5 | {bio} |
nifti2dicom | 5 | {imaging} |
openslide | 5 | {imaging-dev} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
oscar | 5 | {data,tools,practice} |
rambo-k | 5 | {bio} |
- runcircos-gui | 5 | {bio} |
salmon | 5 | {bio,covid-19} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
elastix | 4 | {imaging} |
- embassy-domainatrix | 4 | {cloud,bio} |
- embassy-domalign | 4 | {cloud,bio} |
- embassy-domsearch | 4 | {cloud,bio} |
- melting | 4 | {cloud,bio} |
ngs-sdk | 4 | {bio-dev} |
- nifti2dicom | 4 | {imaging} |
- nipype | 4 | {imaging,imaging-dev} |
orthanc-mysql | 4 | {imaging} |
- phyutility | 4 | {cloud,bio} |
- saint | 4 | {bio} |
- sibsim4 | 4 | {bio,cloud} |
+ runcircos-gui | 4 | {bio} |
stacks | 4 | {bio} |
tracetuner | 4 | {bio} |
- anfo | 3 | {bio,cloud} |
- arden | 3 | {bio,cloud} |
bart-view | 3 | {imaging} |
bio-tradis | 3 | {bio,bio-dev} |
bitseq | 3 | {bio} |
brig | 3 | {bio} |
canu | 3 | {bio} |
+ embassy-domainatrix | 3 | {cloud,bio} |
+ embassy-domalign | 3 | {cloud,bio} |
+ embassy-domsearch | 3 | {cloud,bio} |
gatb-core | 3 | {bio} |
getdata | 3 | {bio} |
ghmm | 3 | {bio} |
- ipig | 3 | {bio} |
jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
libdivsufsort | 3 | {bio-dev} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
libsbml | 3 | {bio-dev} |
+ melting | 3 | {cloud,bio} |
mhap | 3 | {bio,bio-ngs} |
+ nipype | 3 | {imaging,imaging-dev} |
obitools | 3 | {bio} |
orthanc-postgresql | 3 | {imaging} |
+ phyutility | 3 | {cloud,bio} |
piler | 3 | {bio} |
- proalign | 3 | {bio,bio-phylogeny} |
pymia | 3 | {imaging-dev} |
rdp-classifier | 3 | {bio} |
- rtax | 3 | {cloud,bio} |
+ saint | 3 | {bio} |
+ sibsim4 | 3 | {bio,cloud} |
spread-phy | 3 | {bio,bio-phylogeny} |
- staden | 3 | {bio} |
- zalign | 3 | {cloud,bio} |
+ anfo | 2 | {bio,cloud} |
+ arden | 2 | {bio,cloud} |
assemblytics | 2 | {bio} |
biomaj3-cli | 2 | {cloud} |
blimps | 2 | {bio} |
@@ -98,6 +93,7 @@ Last-Update: Sat, 18 Dec 2021 01:42:05 +0000
fastml | 2 | {bio} |
fsm-lite | 2 | {bio} |
hinge | 2 | {bio} |
+ ipig | 2 | {bio} |
jmodeltest | 2 | {bio-phylogeny,bio} |
libpal-java | 2 | {bio-dev} |
libvistaio | 2 | {imaging-dev} |
@@ -110,19 +106,22 @@ Last-Update: Sat, 18 Dec 2021 01:42:05 +0000
placnet | 2 | {bio} |
plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
+ proalign | 2 | {bio,bio-phylogeny} |
pscan-chip | 2 | {bio} |
qcumber | 2 | {bio} |
rdp-alignment | 2 | {bio} |
+ rtax | 2 | {cloud,bio} |
sga | 2 | {bio} |
sift | 2 | {bio} |
soapaligner | 2 | {bio} |
soapsnp | 2 | {bio} |
sprai | 2 | {bio} |
+ staden | 2 | {bio} |
suitename | 2 | {bio} |
surankco | 2 | {bio} |
tvc | 2 | {bio} |
varna | 2 | {bio} |
- acedb | 1 | {cloud,bio} |
+ zalign | 2 | {cloud,bio} |
atropos | 1 | {bio} |
cufflinks | 1 | {bio,cloud} |
dextractor | 1 | {bio,covid-19} |
@@ -142,6 +141,7 @@ Last-Update: Sat, 18 Dec 2021 01:42:05 +0000
tophat-recondition | 1 | {bio,covid-19} |
trace2dbest | 1 | {bio} |
varscan | 1 | {covid-19,bio} |
+ acedb | 0 | {cloud,bio} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f4e6fc0e5c5ebe638d7b2710cd215f5289d33082
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f4e6fc0e5c5ebe638d7b2710cd215f5289d33082
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