[med-svn] [Git][med-team/libvcflib][master] 2 commits: Install scripts

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / libvcflib


Commits:
2b44df42 by Andreas Tille at 2021-12-24T10:51:51+01:00
Install scripts

- - - - -
852525a1 by Andreas Tille at 2021-12-24T10:59:49+01:00
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/libvcflib-tools.install
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+libvcflib (1.0.2+dfsg-4) unstable; urgency=medium
+
+  * Install scripts
+    Closes: #989014
+
+ -- Andreas Tille <tille at debian.org>  Fri, 24 Dec 2021 10:51:57 +0100
+
 libvcflib (1.0.2+dfsg-3) unstable; urgency=medium
 
   * Fix build with gcc-11


=====================================
debian/libvcflib-tools.install
=====================================
@@ -4,6 +4,6 @@ usr/bin/vcffilter
 usr/bin/vcffixup
 usr/bin/vcfuniqalleles
 usr/bin/vcfallelicprimitives
-scripts/*.R		usr/lib/R/site-library/vcflib
+scripts		usr/lib/vcflib
 usr/bin		usr/lib/vcflib
 debian/wrapper/*	usr/bin


=====================================
debian/rules
=====================================
@@ -47,6 +47,13 @@ override_dh_install:
 	    sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' $${pl} ; \
 	done
 
+override_dh_link:
+	dh_link
+	for rscript in debian/libvcflib-tools/usr/lib/vcflib/scripts/*.R ; do \
+	    scriptname=$$(basename $$rscript) ; \
+	    dh_link -p libvcflib-tools usr/lib/vcflib/scripts/$$scriptname usr/lib/R/site-library/vcflib/$$scriptname ; \
+	done
+
 override_dh_fixperms:
 	dh_fixperms
-	chmod -x debian/*/usr/lib/R/site-library/*/*.R
+	chmod -x debian/*/usr/lib/vcflib/scripts/*.R



View it on GitLab: https://salsa.debian.org/med-team/libvcflib/-/compare/438bafc590d203239f59b2d513b333498418dfc5...852525a1b2876135e3ba58ad1df1096d3c9cc880

-- 
View it on GitLab: https://salsa.debian.org/med-team/libvcflib/-/compare/438bafc590d203239f59b2d513b333498418dfc5...852525a1b2876135e3ba58ad1df1096d3c9cc880
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