Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
5cd9d5c3 by Andreas Tille at 2021-02-01T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,116 +1,115 @@
-Last-Update: Mon, 01 Feb 2021 01:42:03 +0000
+Last-Update: Mon, 01 Feb 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 175 | {imaging,covid-19} |
- orthanc | 94 | {practice,imaging,covid-19} |
- orthanc-wsi | 52 | {laboratory,practice,his,oncology,covid-19,imaging} |
+ dcmtk | 176 | {imaging,covid-19} |
+ orthanc | 96 | {practice,imaging,covid-19} |
+ orthanc-wsi | 53 | {laboratory,practice,his,oncology,covid-19,imaging} |
gdcm | 35 | {imaging-dev} |
- dicom3tools | 30 | {imaging} |
+ dicom3tools | 31 | {imaging} |
amide | 29 | {imaging} |
- htsjdk | 25 | {bio-dev} |
- dicomscope | 22 | {imaging} |
- dcm2niix | 20 | {imaging} |
- gdcm | 19 | {imaging,covid-19} |
+ htsjdk | 24 | {bio-dev} |
+ dicomscope | 23 | {imaging} |
+ dcm2niix | 21 | {imaging} |
+ gdcm | 20 | {imaging,covid-19} |
+ odin | 18 | {imaging,imaging-dev} |
nifticlib | 17 | {imaging} |
- odin | 16 | {imaging,imaging-dev} |
gnumed-server | 15 | {covid-19,practice} |
plastimatch | 14 | {imaging} |
dicomnifti | 13 | {imaging} |
gdcm | 13 | {imaging-dev} |
- minc-tools | 12 | {imaging} |
+ minc-tools | 13 | {imaging} |
pixelmed | 12 | {imaging} |
insighttoolkit4 | 11 | {imaging-dev} |
king | 10 | {imaging,typesetting} |
ngs-sdk | 10 | {bio-dev} |
adun.app | 9 | {bio} |
invesalius | 9 | {imaging} |
- jebl2 | 9 | {bio-dev} |
openslide | 9 | {imaging} |
- biojava-live | 8 | {bio-dev} |
ea-utils | 8 | {bio} |
+ jebl2 | 8 | {bio-dev} |
+ mia | 8 | {imaging} |
multiqc | 8 | {covid-19,bio} |
- fastlink | 7 | {bio,cloud} |
+ vtk-dicom | 8 | {imaging} |
+ biojava-live | 7 | {bio-dev} |
ghmm | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
- mauve-aligner | 7 | {bio} |
- mia | 7 | {imaging} |
mipe | 7 | {bio,cloud} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
prime-phylo | 7 | {bio,cloud} |
- vtk-dicom | 7 | {imaging} |
bamkit | 6 | {covid-19,bio} |
biomaj3-cli | 6 | {cloud} |
bio-tradis | 6 | {bio,bio-dev} |
- embassy-domainatrix | 6 | {bio,cloud} |
- embassy-domsearch | 6 | {cloud,bio} |
+ fastlink | 6 | {bio,cloud} |
jellyfish1 | 6 | {bio} |
lagan | 6 | {bio} |
libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
- melting | 6 | {bio,cloud} |
- perm | 6 | {cloud,bio} |
+ mauve-aligner | 6 | {bio} |
+ pymia | 6 | {imaging-dev} |
rambo-k | 6 | {bio} |
runcircos-gui | 6 | {bio} |
- saint | 6 | {bio} |
seqsero | 6 | {bio} |
- spread-phy | 6 | {bio,bio-phylogeny} |
- staden | 6 | {bio} |
tracetuner | 6 | {bio} |
beast-mcmc | 5 | {bio-phylogeny,bio} |
bitseq | 5 | {bio} |
- busco | 5 | {covid-19,bio} |
ecopcr | 5 | {bio} |
+ embassy-domainatrix | 5 | {bio,cloud} |
+ embassy-domsearch | 5 | {cloud,bio} |
estscan | 5 | {bio} |
lamarc | 5 | {bio} |
- librdp-taxonomy-tree-java | 5 | {bio-dev} |
+ libsbml | 5 | {bio-dev} |
+ melting | 5 | {bio,cloud} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
+ perm | 5 | {cloud,bio} |
phast | 5 | {bio} |
- pymia | 5 | {imaging-dev} |
- rdp-alignment | 5 | {bio} |
- rdp-classifier | 5 | {bio} |
- salmid | 5 | {bio} |
+ saint | 5 | {bio} |
+ spread-phy | 5 | {bio,bio-phylogeny} |
+ staden | 5 | {bio} |
treeview | 5 | {bio-phylogeny,bio} |
- anfo | 4 | {cloud,bio} |
bart-view | 4 | {imaging} |
brig | 4 | {bio} |
+ busco | 4 | {covid-19,bio} |
clonalorigin | 4 | {bio} |
cufflinks | 4 | {cloud,bio} |
elastix | 4 | {imaging} |
- embassy-domalign | 4 | {cloud,bio} |
libdivsufsort | 4 | {bio-dev} |
libpal-java | 4 | {bio-dev} |
- libsbml | 4 | {bio-dev} |
+ librdp-taxonomy-tree-java | 4 | {bio-dev} |
nifticlib | 4 | {imaging-dev} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
- paraclu | 4 | {bio,cloud} |
pbdagcon | 4 | {bio} |
- phyutility | 4 | {bio,cloud} |
piler | 4 | {bio} |
- proalign | 4 | {bio,bio-phylogeny} |
prottest | 4 | {bio,bio-phylogeny} |
pscan-chip | 4 | {bio} |
qcumber | 4 | {bio} |
quorum | 4 | {bio} |
- sibsim4 | 4 | {cloud,bio} |
+ rdp-alignment | 4 | {bio} |
+ rdp-classifier | 4 | {bio} |
+ salmid | 4 | {bio} |
+ anfo | 3 | {cloud,bio} |
arden | 3 | {bio,cloud} |
assemblytics | 3 | {bio} |
blimps | 3 | {bio} |
canu | 3 | {bio} |
dicompyler | 3 | {oncology} |
+ embassy-domalign | 3 | {cloud,bio} |
fastml | 3 | {bio} |
getdata | 3 | {bio} |
- ipig | 3 | {bio} |
jmodeltest | 3 | {bio,bio-phylogeny} |
mhap | 3 | {bio,bio-ngs} |
microbegps | 3 | {bio} |
ngs-sdk | 3 | {bio-dev} |
+ paraclu | 3 | {bio,cloud} |
+ phyutility | 3 | {bio,cloud} |
+ proalign | 3 | {bio,bio-phylogeny} |
rtax | 3 | {bio,cloud} |
salmon | 3 | {covid-19,bio} |
+ sibsim4 | 3 | {cloud,bio} |
sift | 3 | {bio} |
soapsnp | 3 | {bio} |
stacks | 3 | {bio} |
@@ -118,14 +117,13 @@ Last-Update: Mon, 01 Feb 2021 01:42:03 +0000
surankco | 3 | {bio} |
tvc | 3 | {bio} |
yaha | 3 | {bio} |
- zalign | 3 | {cloud,bio} |
blasr | 2 | {bio,bio-ngs} |
cat-bat | 2 | {covid-19,bio} |
clonalframeml | 2 | {bio,covid-19} |
delly | 2 | {bio,covid-19} |
fsm-lite | 2 | {bio} |
- gatb-core | 2 | {bio} |
hinge | 2 | {bio} |
+ ipig | 2 | {bio} |
libmuscle | 2 | {bio-dev} |
logol | 2 | {bio} |
metaphlan2 | 2 | {bio} |
@@ -139,10 +137,12 @@ Last-Update: Mon, 01 Feb 2021 01:42:03 +0000
spaced | 2 | {bio} |
sprai | 2 | {bio} |
srf | 2 | {bio-dev} |
+ zalign | 2 | {cloud,bio} |
atropos | 1 | {bio} |
bambamc | 1 | {bio-dev} |
dextractor | 1 | {bio,covid-19} |
emmax | 1 | {bio} |
+ gatb-core | 1 | {bio} |
gatb-core | 1 | {bio-dev} |
gifticlib | 1 | {imaging-dev} |
libbio-mage-utils-perl | 1 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5cd9d5c3f411dae70a38be9d56e0ac0bfe84c7f5
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5cd9d5c3f411dae70a38be9d56e0ac0bfe84c7f5
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