Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
5cbf42da by Andreas Tille at 2021-02-18T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,17 +1,17 @@
-Last-Update: Thu, 18 Feb 2021 01:42:03 +0000
+Last-Update: Thu, 18 Feb 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 180 | {imaging,covid-19} |
- orthanc | 99 | {practice,imaging,covid-19} |
- orthanc-wsi | 52 | {laboratory,practice,his,oncology,covid-19,imaging} |
- amide | 40 | {imaging} |
- gdcm | 37 | {imaging-dev} |
- dicom3tools | 36 | {imaging} |
+ orthanc | 98 | {practice,imaging,covid-19} |
+ orthanc-wsi | 50 | {laboratory,practice,his,oncology,covid-19,imaging} |
+ amide | 41 | {imaging} |
+ gdcm | 39 | {imaging-dev} |
+ dicom3tools | 37 | {imaging} |
dicomscope | 32 | {imaging} |
gdcm | 24 | {imaging,covid-19} |
- dcm2niix | 22 | {imaging} |
- htsjdk | 22 | {bio-dev} |
+ htsjdk | 24 | {bio-dev} |
+ dcm2niix | 21 | {imaging} |
dicomnifti | 20 | {imaging} |
odin | 20 | {imaging,imaging-dev} |
nifticlib | 19 | {imaging} |
@@ -21,61 +21,57 @@ Last-Update: Thu, 18 Feb 2021 01:42:03 +0000
gnumed-server | 14 | {covid-19,practice} |
openslide | 13 | {imaging} |
pixelmed | 13 | {imaging} |
- adun.app | 12 | {bio} |
gdcm | 12 | {imaging-dev} |
+ adun.app | 11 | {bio} |
king | 11 | {imaging,typesetting} |
+ ngs-sdk | 11 | {bio-dev} |
vtk-dicom | 11 | {imaging} |
insighttoolkit4 | 10 | {imaging-dev} |
- ngs-sdk | 10 | {bio-dev} |
nifti2dicom | 10 | {imaging} |
- ea-utils | 8 | {bio} |
- jebl2 | 8 | {bio-dev} |
- jellyfish1 | 8 | {bio} |
+ mia | 9 | {imaging} |
+ orthanc-webviewer | 9 | {imaging} |
melting | 8 | {bio,cloud} |
- mia | 8 | {imaging} |
multiqc | 8 | {covid-19,bio} |
- orthanc-webviewer | 8 | {imaging} |
biojava-live | 7 | {bio-dev} |
+ ea-utils | 7 | {bio} |
elastix | 7 | {imaging} |
- fastlink | 7 | {bio,cloud} |
- mipe | 7 | {bio,cloud} |
+ jebl2 | 7 | {bio-dev} |
+ jellyfish1 | 7 | {bio} |
ngs-sdk | 7 | {bio-dev} |
- spread-phy | 7 | {bio,bio-phylogeny} |
treeview | 7 | {bio-phylogeny,bio} |
- beast-mcmc | 6 | {bio-phylogeny,bio} |
- biomaj3-cli | 6 | {cloud} |
dicompyler | 6 | {oncology} |
- embassy-domsearch | 6 | {cloud,bio} |
+ fastlink | 6 | {bio,cloud} |
lamarc | 6 | {bio} |
libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
mauve-aligner | 6 | {bio} |
+ mipe | 6 | {bio,cloud} |
obitools | 6 | {bio} |
orthanc-dicomweb | 6 | {covid-19,imaging} |
- prime-phylo | 6 | {bio,cloud} |
runcircos-gui | 6 | {bio} |
saint | 6 | {bio} |
salmon | 6 | {covid-19,bio} |
+ spread-phy | 6 | {bio,bio-phylogeny} |
anfo | 5 | {cloud,bio} |
bart-view | 5 | {imaging} |
+ beast-mcmc | 5 | {bio-phylogeny,bio} |
+ biomaj3-cli | 5 | {cloud} |
bio-tradis | 5 | {bio,bio-dev} |
- bitseq | 5 | {bio} |
brig | 5 | {bio} |
canu | 5 | {bio} |
cufflinks | 5 | {cloud,bio} |
ecopcr | 5 | {bio} |
- embassy-domainatrix | 5 | {bio,cloud} |
- fastml | 5 | {bio} |
+ embassy-domsearch | 5 | {cloud,bio} |
lagan | 5 | {bio} |
libpal-java | 5 | {bio-dev} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
- librg-utils-perl | 5 | {bio} |
libsbml | 5 | {bio-dev} |
mhap | 5 | {bio,bio-ngs} |
perm | 5 | {cloud,bio} |
phast | 5 | {bio} |
phyutility | 5 | {bio,cloud} |
piler | 5 | {bio} |
+ prime-phylo | 5 | {bio,cloud} |
prottest | 5 | {bio,bio-phylogeny} |
pscan-chip | 5 | {bio} |
pymia | 5 | {imaging-dev} |
@@ -85,24 +81,27 @@ Last-Update: Thu, 18 Feb 2021 01:42:03 +0000
sibsim4 | 5 | {cloud,bio} |
soapsnp | 5 | {bio} |
staden | 5 | {bio} |
- suitename | 5 | {bio} |
tracetuner | 5 | {bio} |
arden | 4 | {bio,cloud} |
assemblytics | 4 | {bio} |
atropos | 4 | {bio} |
bamkit | 4 | {covid-19,bio} |
+ bitseq | 4 | {bio} |
busco | 4 | {covid-19,bio} |
clonalframeml | 4 | {bio,covid-19} |
clonalorigin | 4 | {bio} |
+ embassy-domainatrix | 4 | {bio,cloud} |
embassy-domalign | 4 | {cloud,bio} |
- estscan | 4 | {bio} |
+ fastml | 4 | {bio} |
fsm-lite | 4 | {bio} |
getdata | 4 | {bio} |
hinge | 4 | {bio} |
ipig | 4 | {bio} |
jmodeltest | 4 | {bio,bio-phylogeny} |
libdivsufsort | 4 | {bio-dev} |
+ librg-utils-perl | 4 | {bio} |
microbegps | 4 | {bio} |
+ ngs-sdk | 4 | {bio-dev} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
paraclu | 4 | {bio,cloud} |
@@ -119,14 +118,14 @@ Last-Update: Thu, 18 Feb 2021 01:42:03 +0000
spaced | 4 | {bio} |
sprai | 4 | {bio} |
stacks | 4 | {bio} |
+ suitename | 4 | {bio} |
surankco | 4 | {bio} |
yaha | 4 | {bio} |
cat-bat | 3 | {covid-19,bio} |
delly | 3 | {bio,covid-19} |
+ estscan | 3 | {bio} |
gatb-core | 3 | {bio} |
- ghmm | 3 | {bio} |
logol | 3 | {bio} |
- ngs-sdk | 3 | {bio-dev} |
nifticlib | 3 | {imaging-dev} |
pbdagcon | 3 | {bio} |
samblaster | 3 | {covid-19,bio} |
@@ -137,6 +136,7 @@ Last-Update: Thu, 18 Feb 2021 01:42:03 +0000
blimps | 2 | {bio} |
dextractor | 2 | {bio,covid-19} |
emmax | 2 | {bio} |
+ ghmm | 2 | {bio} |
kmerresistance | 2 | {bio} |
metaphlan2 | 2 | {bio} |
nanosv | 2 | {bio,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5cbf42dada136e13f353596b6b37940356ce58bd
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5cbf42dada136e13f353596b6b37940356ce58bd
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