[med-svn] [Git][med-team/seqsero][master] 2 commits: Tried to add autopkgtest data

[Shruti Sridhar]

Shruti Sridhar pushed to branch master at Debian Med / seqsero


Commits:
652ff0c4 by Shruti Sridhar at 2021-02-23T22:06:53+05:30
Tried to add autopkgtest data

- - - - -
22ccc929 by Shruti Sridhar at 2021-02-23T22:21:15+05:30
Tried looking for the file

- - - - -


4 changed files:

- + debian/examples
- + debian/tests/control
- + debian/tests/data/single_read.fasta
- + debian/tests/run-unit-test


Changes:

=====================================
debian/examples
=====================================
@@ -0,0 +1 @@
+debian/tests/data/*
\ No newline at end of file


=====================================
debian/tests/control
=====================================
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: 
+Restrictions: allow-stderr


=====================================
debian/tests/data/single_read.fasta
=====================================
@@ -0,0 +1,4 @@
+>gnl|SRA|SRR11341581.1.1 1 (Biological)
+AGAAGAAGCACAGGATCTTCTCAGCTCAGGATGTAGTTTCCATATCCTTAAAGTGAAGGG
+CTAGTGACTCTAAAAAAGGGACAATTATCATTCACTTTTGAGTTAATTTTATAATCTAGT
+TACAAGGCTAGATTTATTAAGAGGCTTTGA
\ No newline at end of file


=====================================
debian/tests/run-unit-test
=====================================
@@ -0,0 +1,21 @@
+#!/bin/bash
+set -e
+
+pkg=seqsero
+
+export LC_ALL=C.UTF-8
+if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
+fi
+cd /
+find . | grep seqsero
+cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"
+
+cd "${AUTOPKGTEST_TMP}"
+
+
+
+
+
+



View it on GitLab: https://salsa.debian.org/med-team/seqsero/-/compare/53b255c016769314b11f648cdbcd9c64fa5f2229...22ccc929c3e498bb3ba4ee7b6010d58b8b95fc71

-- 
View it on GitLab: https://salsa.debian.org/med-team/seqsero/-/compare/53b255c016769314b11f648cdbcd9c64fa5f2229...22ccc929c3e498bb3ba4ee7b6010d58b8b95fc71
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