Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
38fca5d7 by Andreas Tille at 2021-02-26T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,44 +1,45 @@
-Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
+Last-Update: Fri, 26 Feb 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 185 | {covid-19,imaging} |
orthanc | 97 | {practice,covid-19,imaging} |
orthanc-wsi | 48 | {his,imaging,practice,laboratory,covid-19,oncology} |
- amide | 43 | {imaging} |
+ amide | 44 | {imaging} |
gdcm | 43 | {imaging-dev} |
- dicom3tools | 33 | {imaging} |
- dicomscope | 28 | {imaging} |
- htsjdk | 23 | {bio-dev} |
- dcm2niix | 19 | {imaging} |
- dicomnifti | 19 | {imaging} |
- gdcm | 18 | {covid-19,imaging} |
- nifticlib | 18 | {imaging} |
- odin | 17 | {imaging-dev,imaging} |
+ dicom3tools | 35 | {imaging} |
+ dicomscope | 30 | {imaging} |
+ htsjdk | 24 | {bio-dev} |
+ dcm2niix | 23 | {imaging} |
+ dicomnifti | 20 | {imaging} |
+ nifticlib | 20 | {imaging} |
+ odin | 19 | {imaging-dev,imaging} |
+ gdcm | 17 | {covid-19,imaging} |
+ minc-tools | 17 | {imaging} |
invesalius | 16 | {imaging} |
- minc-tools | 16 | {imaging} |
gnumed-server | 14 | {practice,covid-19} |
plastimatch | 14 | {imaging} |
gdcm | 13 | {imaging-dev} |
- pixelmed | 12 | {imaging} |
+ pixelmed | 13 | {imaging} |
+ vtk-dicom | 12 | {imaging} |
ngs-sdk | 11 | {bio-dev} |
- vtk-dicom | 11 | {imaging} |
+ openslide | 11 | {imaging} |
adun.app | 10 | {bio} |
+ mia | 10 | {imaging} |
nifti2dicom | 10 | {imaging} |
- openslide | 10 | {imaging} |
- mia | 9 | {imaging} |
+ jebl2 | 9 | {bio-dev} |
+ king | 9 | {imaging,typesetting} |
+ multiqc | 9 | {bio,covid-19} |
orthanc-webviewer | 9 | {imaging} |
insighttoolkit4 | 8 | {imaging-dev} |
- jebl2 | 8 | {bio-dev} |
jellyfish1 | 8 | {bio} |
- king | 8 | {imaging,typesetting} |
melting | 8 | {bio,cloud} |
- multiqc | 8 | {bio,covid-19} |
biojava-live | 7 | {bio-dev} |
- ea-utils | 7 | {bio} |
elastix | 7 | {imaging} |
anfo | 6 | {cloud,bio} |
+ beast-mcmc | 6 | {bio-phylogeny,bio} |
dicompyler | 6 | {oncology} |
+ ea-utils | 6 | {bio} |
libsbml | 6 | {bio-dev} |
ngs-sdk | 6 | {bio-dev} |
orthanc-dicomweb | 6 | {covid-19,imaging} |
@@ -47,7 +48,6 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
treeview | 6 | {bio,bio-phylogeny} |
arden | 5 | {bio,cloud} |
bart-view | 5 | {imaging} |
- beast-mcmc | 5 | {bio-phylogeny,bio} |
bio-tradis | 5 | {bio,bio-dev} |
bitseq | 5 | {bio} |
ecopcr | 5 | {bio} |
@@ -67,7 +67,6 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
pymia | 5 | {imaging-dev} |
runcircos-gui | 5 | {bio} |
saint | 5 | {bio} |
- salmid | 5 | {bio} |
salmon | 5 | {bio,covid-19} |
sibsim4 | 5 | {bio,cloud} |
soapsnp | 5 | {bio} |
@@ -81,6 +80,7 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
estscan | 4 | {bio} |
fsm-lite | 4 | {bio} |
getdata | 4 | {bio} |
+ ghmm | 4 | {bio} |
hinge | 4 | {bio} |
ipig | 4 | {bio} |
jmodeltest | 4 | {bio,bio-phylogeny} |
@@ -89,16 +89,15 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
mauve-aligner | 4 | {bio} |
openslide | 4 | {imaging-dev} |
paraclu | 4 | {bio,cloud} |
- piler | 4 | {bio} |
proalign | 4 | {bio-phylogeny,bio} |
pscan-chip | 4 | {bio} |
rtax | 4 | {cloud,bio} |
+ salmid | 4 | {bio} |
samblaster | 4 | {bio,covid-19} |
seqsero | 4 | {bio} |
soapaligner | 4 | {bio} |
stacks | 4 | {bio} |
staden | 4 | {bio} |
- tracetuner | 4 | {bio} |
yaha | 4 | {bio} |
zalign | 4 | {bio,cloud} |
atropos | 3 | {bio} |
@@ -108,11 +107,11 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
delly | 3 | {covid-19,bio} |
fastml | 3 | {bio} |
gatb-core | 3 | {bio} |
- ghmm | 3 | {bio} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
mhap | 3 | {bio,bio-ngs} |
microbegps | 3 | {bio} |
orthanc-postgresql | 3 | {imaging} |
+ piler | 3 | {bio} |
placnet | 3 | {bio} |
qcumber | 3 | {bio} |
rambo-k | 3 | {bio} |
@@ -124,6 +123,7 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
sprai | 3 | {bio} |
suitename | 3 | {bio} |
surankco | 3 | {bio} |
+ tracetuner | 3 | {bio} |
tvc | 3 | {bio} |
bamkit | 2 | {covid-19,bio} |
blimps | 2 | {bio} |
@@ -133,6 +133,7 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
nanosv | 2 | {covid-19,bio} |
nifticlib | 2 | {imaging-dev} |
orthanc-mysql | 2 | {imaging} |
+ oscar | 2 | {data,practice,tools} |
pbdagcon | 2 | {bio} |
sambamba | 2 | {bio} |
sift | 2 | {bio} |
@@ -155,7 +156,6 @@ Last-Update: Fri, 26 Feb 2021 01:42:04 +0000
opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
orthanc-gdcm | 1 | {imaging} |
- oscar | 1 | {data,practice,tools} |
papyrus | 1 | {imaging-dev} |
parallel-fastq-dump | 1 | {covid-19} |
pigx-rnaseq | 1 | {bio,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/38fca5d7c00c1bcb438651800b2cc5e56cdcbcea
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/38fca5d7c00c1bcb438651800b2cc5e56cdcbcea
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