Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
7077de82 by Andreas Tille at 2021-01-08T13:47:30+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,56 +1,55 @@
-Last-Update: Fri, 08 Jan 2021 01:42:04 +0000
+Last-Update: Fri, 08 Jan 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 189 | {imaging,covid-19} |
- orthanc | 98 | {covid-19,imaging,practice} |
+ dcmtk | 186 | {imaging,covid-19} |
+ orthanc | 99 | {covid-19,imaging,practice} |
orthanc-wsi | 53 | {imaging,his,laboratory,oncology,covid-19,practice} |
gdcm | 37 | {imaging-dev} |
amide | 32 | {imaging} |
- dicomscope | 30 | {imaging} |
- dicom3tools | 28 | {imaging} |
- htsjdk | 25 | {bio-dev} |
- dcm2niix | 21 | {imaging} |
- invesalius | 20 | {imaging} |
+ dicomscope | 29 | {imaging} |
+ dicom3tools | 27 | {imaging} |
+ htsjdk | 24 | {bio-dev} |
+ dcm2niix | 20 | {imaging} |
+ invesalius | 19 | {imaging} |
nifticlib | 19 | {imaging} |
odin | 18 | {imaging,imaging-dev} |
dicomnifti | 16 | {imaging} |
gdcm | 16 | {covid-19,imaging} |
- gnumed-server | 15 | {covid-19,practice} |
- king | 15 | {imaging,typesetting} |
+ gnumed-server | 16 | {covid-19,practice} |
minc-tools | 15 | {imaging} |
gdcm | 14 | {imaging-dev} |
+ king | 14 | {imaging,typesetting} |
plastimatch | 14 | {imaging} |
mia | 13 | {imaging} |
- ngs-sdk | 13 | {bio-dev} |
openslide | 13 | {imaging} |
+ ngs-sdk | 12 | {bio-dev} |
pixelmed | 12 | {imaging} |
ngs-sdk | 11 | {bio-dev} |
adun.app | 10 | {bio} |
- biosig | 10 | {physics,imaging} |
- melting | 10 | {cloud,bio} |
obitools | 10 | {bio} |
vtk-dicom | 10 | {imaging} |
+ biosig | 9 | {physics,imaging} |
+ melting | 9 | {cloud,bio} |
+ orthanc-webviewer | 9 | {imaging} |
dicompyler | 8 | {oncology} |
fastlink | 8 | {cloud,bio} |
librg-utils-perl | 8 | {bio} |
- orthanc-webviewer | 8 | {imaging} |
bamkit | 7 | {covid-19,bio} |
biojava-live | 7 | {bio-dev} |
bio-tradis | 7 | {bio-dev,bio} |
ea-utils | 7 | {bio} |
insighttoolkit4 | 7 | {imaging-dev} |
lagan | 7 | {bio} |
- multiqc | 7 | {covid-19,bio} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
treeview | 7 | {bio,bio-phylogeny} |
busco | 6 | {bio,covid-19} |
embassy-domsearch | 6 | {cloud,bio} |
jebl2 | 6 | {bio-dev} |
+ multiqc | 6 | {covid-19,bio} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
orthanc-postgresql | 6 | {imaging} |
- phyutility | 6 | {bio,cloud} |
prime-phylo | 6 | {bio,cloud} |
proalign | 6 | {bio-phylogeny,bio} |
rambo-k | 6 | {bio} |
@@ -69,6 +68,7 @@ Last-Update: Fri, 08 Jan 2021 01:42:04 +0000
orthanc-mysql | 5 | {imaging} |
phast | 5 | {bio} |
phybin | 5 | {bio} |
+ phyutility | 5 | {bio,cloud} |
placnet | 5 | {bio} |
pscan-chip | 5 | {bio} |
pymia | 5 | {imaging-dev} |
@@ -93,7 +93,6 @@ Last-Update: Fri, 08 Jan 2021 01:42:04 +0000
quorum | 4 | {bio} |
runcircos-gui | 4 | {bio} |
samblaster | 4 | {bio,covid-19} |
- stacks | 4 | {bio} |
blasr | 3 | {bio-ngs,bio} |
clonalframeml | 3 | {covid-19,bio} |
clonalorigin | 3 | {bio} |
@@ -120,6 +119,7 @@ Last-Update: Fri, 08 Jan 2021 01:42:04 +0000
soapsnp | 3 | {bio} |
spaced | 3 | {bio} |
sprai | 3 | {bio} |
+ stacks | 3 | {bio} |
blimps | 2 | {bio} |
brig | 2 | {bio} |
dindel | 2 | {bio} |
@@ -151,7 +151,6 @@ Last-Update: Fri, 08 Jan 2021 01:42:04 +0000
nifticlib | 1 | {imaging-dev} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
- pbcopper | 1 | {bio-dev} |
pigx-rnaseq | 1 | {bio,covid-19} |
plasmidid | 1 | {covid-19,bio} |
samtools-legacy | 1 | {bio-dev} |
@@ -219,13 +218,14 @@ Last-Update: Fri, 08 Jan 2021 01:42:04 +0000
oscar | 0 | {tools,practice,data} |
papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
+ pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
pilercr | 0 | {bio} |
pique | 0 | {bio} |
pplacer | 0 | {bio-phylogeny,bio,covid-19} |
python-bcbio-gff | 0 | {bio-dev} |
- python-seqcluster | 0 | {bio-dev,covid-19} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
q2-sample-classifier | 0 | {bio-dev,bio} |
resfinder-db | 0 | {bio} |
sambamba | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7077de82d304fbb7bdb696bafa980319c529a2a7
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7077de82d304fbb7bdb696bafa980319c529a2a7
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