[med-svn] [Git][med-team/hyphy][master] 4 commits: routine-update: New upstream version

[Nilesh Patra]

Nilesh Patra pushed to branch master at Debian Med / hyphy


Commits:
b7b52506 by Nilesh Patra at 2021-01-10T11:25:11+05:30
routine-update: New upstream version

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41acd7e8 by Nilesh Patra at 2021-01-10T11:25:13+05:30
New upstream version 2.5.25+dfsg
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947b17e2 by Nilesh Patra at 2021-01-10T11:25:24+05:30
Update upstream source from tag 'upstream/2.5.25+dfsg'

Update to upstream version '2.5.25+dfsg'
with Debian dir 008cda94df5c4d076b318897f7847757f14d7342
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e997fbff by Nilesh Patra at 2021-01-10T11:25:52+05:30
routine-update: Ready to upload to unstable

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30 changed files:

- debian/changelog
- res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
- res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
- res/TemplateBatchFiles/SelectionAnalyses/MEME.bf
- res/TemplateBatchFiles/SelectionAnalyses/contrast-fel.bf
- res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
- res/TemplateBatchFiles/libv3/UtilityFunctions.bf
- res/TemplateBatchFiles/libv3/all-terms.bf
- res/TemplateBatchFiles/libv3/convenience/regexp.bf
- res/TemplateBatchFiles/libv3/models/codon/BS_REL.bf
- res/TemplateBatchFiles/libv3/models/codon/MG_REV.bf
- res/TemplateBatchFiles/libv3/models/model_functions.bf
- res/TemplateBatchFiles/libv3/models/parameters.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- res/TemplateBatchFiles/libv3/tasks/mpi.bf
- res/TemplateBatchFiles/libv3/tasks/trees.bf
- src/core/associative_list.cpp
- src/core/avllist.cpp
- src/core/batchlan.cpp
- src/core/batchlan2.cpp
- src/core/batchlanhelpers.cpp
- src/core/batchlanruntime.cpp
- src/core/category.cpp
- src/core/dataset.cpp
- src/core/formula.cpp
- src/core/fstring.cpp
- src/core/global_things.cpp
- src/core/include/batchlan.h
- src/core/include/dataset.h
- src/core/include/formula.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/compare/b31ec3d8d47f9366d359904cbc38d4bbb08a7b52...e997fbffb757a78e6c0010833ba0cc0d152aff93

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View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/compare/b31ec3d8d47f9366d359904cbc38d4bbb08a7b52...e997fbffb757a78e6c0010833ba0cc0d152aff93
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