Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f7e76851 by Andreas Tille at 2021-01-11T13:47:10+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,26 +1,26 @@
-Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
+Last-Update: Mon, 11 Jan 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 190 | {imaging,covid-19} |
- orthanc | 100 | {covid-19,imaging,practice} |
- orthanc-wsi | 53 | {imaging,his,laboratory,oncology,covid-19,practice} |
- gdcm | 38 | {imaging-dev} |
- amide | 31 | {imaging} |
+ dcmtk | 186 | {imaging,covid-19} |
+ orthanc | 102 | {covid-19,imaging,practice} |
+ orthanc-wsi | 54 | {imaging,his,laboratory,oncology,covid-19,practice} |
+ gdcm | 37 | {imaging-dev} |
+ amide | 30 | {imaging} |
+ dicomscope | 30 | {imaging} |
dicom3tools | 29 | {imaging} |
- dicomscope | 29 | {imaging} |
htsjdk | 24 | {bio-dev} |
- invesalius | 19 | {imaging} |
nifticlib | 19 | {imaging} |
dcm2niix | 18 | {imaging} |
gnumed-server | 18 | {covid-19,practice} |
- odin | 18 | {imaging,imaging-dev} |
- gdcm | 16 | {covid-19,imaging} |
+ invesalius | 18 | {imaging} |
+ odin | 17 | {imaging,imaging-dev} |
dicomnifti | 15 | {imaging} |
gdcm | 15 | {imaging-dev} |
+ gdcm | 15 | {covid-19,imaging} |
minc-tools | 14 | {imaging} |
+ king | 13 | {imaging,typesetting} |
pixelmed | 13 | {imaging} |
- king | 12 | {imaging,typesetting} |
openslide | 12 | {imaging} |
plastimatch | 12 | {imaging} |
mia | 11 | {imaging} |
@@ -39,7 +39,6 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
biojava-live | 6 | {bio-dev} |
bio-tradis | 6 | {bio-dev,bio} |
busco | 6 | {bio,covid-19} |
- dicompyler | 6 | {oncology} |
ea-utils | 6 | {bio} |
libminc | 6 | {imaging-dev} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
@@ -47,6 +46,7 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
pymia | 6 | {imaging-dev} |
treeview | 6 | {bio,bio-phylogeny} |
bart-view | 5 | {imaging} |
+ dicompyler | 5 | {oncology} |
embassy-domsearch | 5 | {cloud,bio} |
jebl2 | 5 | {bio-dev} |
lagan | 5 | {bio} |
@@ -56,6 +56,7 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
orthanc-mysql | 5 | {imaging} |
rambo-k | 5 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
+ biomaj3-cli | 4 | {cloud} |
biomaj3-daemon | 4 | {bio} |
canu | 4 | {bio} |
embassy-domalign | 4 | {cloud,bio} |
@@ -65,6 +66,7 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
multiqc | 4 | {covid-19,bio} |
prime-phylo | 4 | {bio,cloud} |
proalign | 4 | {bio-phylogeny,bio} |
+ pscan-chip | 4 | {bio} |
rdp-alignment | 4 | {bio} |
saint | 4 | {bio} |
seqsero | 4 | {bio} |
@@ -73,9 +75,8 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
anfo | 3 | {cloud,bio} |
arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
- biomaj3-cli | 3 | {cloud} |
bitseq | 3 | {bio} |
- clonalorigin | 3 | {bio} |
+ ecopcr | 3 | {bio} |
elastix | 3 | {imaging} |
getdata | 3 | {bio} |
lamarc | 3 | {bio} |
@@ -88,19 +89,17 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
phybin | 3 | {bio} |
phyutility | 3 | {bio,cloud} |
placnet | 3 | {bio} |
- pscan-chip | 3 | {bio} |
rdp-classifier | 3 | {bio} |
runcircos-gui | 3 | {bio} |
salmid | 3 | {bio} |
samblaster | 3 | {bio,covid-19} |
- stacks | 3 | {bio} |
staden | 3 | {bio} |
zalign | 3 | {bio,cloud} |
blasr | 2 | {bio-ngs,bio} |
blimps | 2 | {bio} |
clonalframeml | 2 | {covid-19,bio} |
+ clonalorigin | 2 | {bio} |
delly | 2 | {covid-19,bio} |
- ecopcr | 2 | {bio} |
embassy-domainatrix | 2 | {bio,cloud} |
fastml | 2 | {bio} |
ghmm | 2 | {bio} |
@@ -121,6 +120,7 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
soapsnp | 2 | {bio} |
spaced | 2 | {bio} |
sprai | 2 | {bio} |
+ stacks | 2 | {bio} |
brig | 1 | {bio} |
bustools | 1 | {bio,covid-19} |
cat-bat | 1 | {bio,covid-19} |
@@ -131,7 +131,9 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
estscan | 1 | {bio} |
fsm-lite | 1 | {bio} |
gatb-core | 1 | {bio} |
+ gifticlib | 1 | {imaging-dev} |
hinge | 1 | {bio} |
+ kmerresistance | 1 | {bio} |
libchado-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
libpal-java | 1 | {bio-dev} |
@@ -142,12 +144,14 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
+ papyrus | 1 | {imaging-dev} |
plasmidid | 1 | {covid-19,bio} |
prottest | 1 | {bio,bio-phylogeny} |
qcumber | 1 | {bio} |
salmon | 1 | {covid-19,bio} |
segemehl | 1 | {bio} |
sight | 1 | {imaging} |
+ simpleitk | 1 | {imaging-dev} |
skesa | 1 | {bio} |
skewer | 1 | {bio} |
srf | 1 | {bio-dev} |
@@ -162,8 +166,8 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
bambamc | 0 | {bio-dev} |
bbmap | 0 | {bio,covid-19} |
biojava4-live | 0 | {bio-dev} |
- biosig | 0 | {physics} |
biosig | 0 | {imaging-dev,physics} |
+ biosig | 0 | {physics} |
biosyntax | 0 | {bio} |
bmtk | 0 | {psychology} |
camp | 0 | {imaging-dev} |
@@ -172,10 +176,8 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
emboss-explorer | 0 | {bio} |
fis-gtm | 0 | {his} |
gatb-core | 0 | {bio-dev} |
- gifticlib | 0 | {imaging-dev} |
htscodecs | 0 | {covid-19,bio-dev} |
intake | 0 | {bio,bio-dev} |
- kmerresistance | 0 | {bio} |
libbigwig | 0 | {bio-dev} |
libbiod | 0 | {bio-dev} |
libbioparser-dev | 0 | {bio-dev} |
@@ -211,7 +213,6 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
nifticlib | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
oscar | 0 | {tools,practice,data} |
- papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
@@ -248,5 +249,5 @@ Last-Update: Mon, 11 Jan 2021 01:42:03 +0000
orthanc-gdcm | -1 | {imaging} |
orthanc-python | -1 | {covid-19} |
sight | -1 | {imaging-dev} |
-(278 rows)
+(279 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f7e7685178d7b955dc8f3782601c425513fedd22
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f7e7685178d7b955dc8f3782601c425513fedd22
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